RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 SLC38A3Q99624 504 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 STN1Q9H668 368 aaKnown RBP17.84■□□□□ 0.45
MKS1-209ENST00000580127 TAS2R14Q9NYV8 317 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 DNPEPQ9ULA0 475 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 TLN1Q9Y490 2541 aaKnown RBP17.83■□□□□ 0.45
MKS1-209ENST00000580127 IGHV1OR21-1A0A087WYE8 117 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 B4E171 279 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 PGLSO95336 258 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 TSPAN7P41732 249 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 POLD2P49005 469 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 EPHB1P54762 984 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 CYP4F2P78329 520 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 ITKQ08881 620 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 ADAMTSL4Q6UY14 1074 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 NRSN1Q8IZ57 195 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 CACNA2D3Q8IZS8 1091 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 NAGSQ8N159 534 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 PELI3Q8N2H9 469 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 ZNF653Q96CK0 615 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 AP2M1Q96CW1 435 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 OR2M4Q96R27 311 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 PEBP4Q96S96 227 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 MGME1Q9BQP7 344 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 ZPBPQ9BS86 351 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 SLC12A9Q9BXP2 914 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 TRIM4Q9C037 500 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 TUBD1Q9UJT1 453 aa17.83■□□□□ 0.44
MKS1-209ENST00000580127 NAV2Q8IVL1 2488 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 TTC24A2A3L6 582 aaPredicted RBP17.82■□□□□ 0.44
MKS1-209ENST00000580127 ZNF891A8MT65 544 aaPredicted RBP17.82■□□□□ 0.44
MKS1-209ENST00000580127 PPM1DO15297 605 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 LRCH4O75427 683 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 FUCA1P04066 466 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 ZNF30P17039 623 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 CR2P20023 1033 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 CA4P22748 312 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 AMPD1P23109 780 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 UGT1A3P35503 534 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 PIGHQ14442 188 aaPredicted RBP17.82■□□□□ 0.44
MKS1-209ENST00000580127 DPYSL2Q16555 572 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 NKAIN2Q5VXU1 208 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 DOK6Q6PKX4 331 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 RBM43Q6ZSC3 357 aaKnown RBP17.82■□□□□ 0.44
MKS1-209ENST00000580127 POLNQ7Z5Q5 900 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 FAM129CQ86XR2 697 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 GALNT13Q8IUC8 556 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 RAVER1Q8IY67 606 aaKnown RBP17.82■□□□□ 0.44
MKS1-209ENST00000580127 EXD1Q8NHP7 514 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 SCARF2Q96GP6 870 aaPredicted RBP17.82■□□□□ 0.44
MKS1-209ENST00000580127 MCCC1Q96RQ3 725 aaPredicted RBP17.82■□□□□ 0.44
MKS1-209ENST00000580127 TRIT1Q9H3H1 467 aaKnown RBP17.82■□□□□ 0.44
MKS1-209ENST00000580127 LMBRD1Q9NUN5 540 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 MYO1AQ9UBC5 1043 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 PPIL1Q9Y3C6 166 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 MAST4O15021 2626 aa17.82■□□□□ 0.44
MKS1-209ENST00000580127 NPIPB15A6NHN6 443 aaPredicted RBP17.81■□□□□ 0.44
MKS1-209ENST00000580127 GOLGA6L22H0YM25 854 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 ATMINO43313 823 aaPredicted RBP17.81■□□□□ 0.44
MKS1-209ENST00000580127 DUX1O43812 170 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 MAFKO60675 156 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 ASMTLO95671 621 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 SLC2A4P14672 509 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 MAP4P27816 1152 aaKnown RBP17.81■□□□□ 0.44
MKS1-209ENST00000580127 KLHL30Q0D2K2 578 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 CCDC122Q5T0U0 273 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 CLEC17AQ6ZS10 378 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 ZNF765Q7L2R6 523 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 TECPR1Q7Z6L1 1165 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 AVL9Q8NBF6 648 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 HSPH1Q92598 858 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 SYT11Q9BT88 431 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 HAUS4Q9H6D7 363 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 AIPL1Q9NZN9 384 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 ZNHIT2Q9UHR6 403 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 TMEM98Q9Y2Y6 226 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 B3GALT1Q9Y5Z6 326 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 HECTD1Q9ULT8 2610 aa17.81■□□□□ 0.44
MKS1-209ENST00000580127 SDK2Q58EX2 2172 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 EFCAB7A8K855 629 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 THRAP10827 490 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 FASLGP48023 281 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 NFKB2Q00653 900 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 MC1RQ01726 317 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 TRAF2Q12933 501 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 KCNAB2Q13303 367 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 PYCR3Q53H96 274 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 WDR74Q6RFH5 385 aaPredicted RBP17.8■□□□□ 0.44
MKS1-209ENST00000580127 CEACAM20Q6UY09 585 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 PGBD5Q8N414 524 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 ZNF564Q8TBZ8 553 aaPredicted RBP17.8■□□□□ 0.44
MKS1-209ENST00000580127 TEKT4Q8WW24 435 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 PATE1Q8WXA2 126 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 GBP4Q96PP9 640 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 CSPG4P5Q96PW8 444 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 FUCA2Q9BTY2 467 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.8■□□□□ 0.44
MKS1-209ENST00000580127 POLR1EQ9GZS1 481 aaKnown RBP17.8■□□□□ 0.44
MKS1-209ENST00000580127 ABCG8Q9H221 673 aa17.8■□□□□ 0.44
MKS1-209ENST00000580127 GPN2Q9H9Y4 310 aaPredicted RBP17.8■□□□□ 0.44
MKS1-209ENST00000580127 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms