RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 CAMK1DQ8IU85 385 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 TP53INP2Q8IXH6 220 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 PNPLA2Q96AD5 504 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 STAMBPL1Q96FJ0 436 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 FAM81BQ96LP2 452 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 COQ10AQ96MF6 247 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 KLC2Q9H0B6 622 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 SLAMF7Q9NQ25 335 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 MN1Q10571 1320 aaPredicted RBP13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 FBN3Q75N90 2809 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 A6NCN8 305 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 FAM72CH0Y354 149 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 DPM1O60762 260 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 CASP14P31944 242 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 ADRA1BP35368 520 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 EPHA4P54764 986 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 MARSP56192 900 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 CDK3Q00526 305 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 IL11RAQ14626 422 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 CHRNA6Q15825 494 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 FAM102AQ5T9C2 384 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 FAM72AQ5TYM5 149 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 SLC6A19Q695T7 634 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 FAM72DQ6L9T8 149 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 ARCQ7LC44 396 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 FAM72BQ86X60 149 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 TRIM59Q8IWR1 403 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 MLKLQ8NB16 471 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 NELFBQ8WX92 580 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 SHC3Q92529 594 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 NCSTNQ92542 709 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 TBC1D31Q96DN5 1066 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 CFAP57Q96MR6 1250 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 UNKQ9C0B0 810 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 EPB41L1Q9H4G0 881 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 SARS2Q9NP81 518 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 KCTD5Q9NXV2 234 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 TMEM59LQ9UK28 342 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 CTNND2Q9UQB3 1225 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 CROCCQ5TZA2 2017 aa13.78□□□□□ -0.2
CSNK1D-211ENST00000579316 ARHGAP10A1A4S6 786 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 PPP1R3GB7ZBB8 358 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 KIAA0754O94854 1291 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 FGFR1OPO95684 399 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 CDH5P33151 784 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 USP8P40818 1118 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 CSNK1DP48730 415 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 XYLT1Q86Y38 959 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 CT55Q8WUE5 264 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 SPOCK2Q92563 424 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 NUS1Q96E22 293 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 C19orf60Q96EN9 201 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 OR2M4Q96R27 311 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 BRD8Q9H0E9 1235 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 ACTL8Q9H568 366 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 ATP13A3Q9H7F0 1226 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 LUZP4Q9P127 313 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 PADI1Q9ULC6 663 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 PLEKHM1Q9Y4G2 1056 aa13.77□□□□□ -0.21
CSNK1D-211ENST00000579316 NDUFA10O95299 355 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 MT-ND3P03897 115 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 CCNYL3P0C7X3 344 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 SERPINA4P29622 427 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 KRT9P35527 623 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 POLD2P49005 469 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 PPM1FP49593 454 aaPredicted RBP13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 YBEYP58557 167 aaPredicted RBP13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 HHEXQ03014 270 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 PTK2Q05397 1052 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 FOXM1Q08050 763 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 LAMB3Q13751 1172 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 LRP8Q14114 963 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 ACOX1Q15067 660 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 PARP15Q460N3 678 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 GJB7Q6PEY0 223 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 TRIM65Q6PJ69 517 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 SASS6Q6UVJ0 657 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 ZNF354CQ86Y25 554 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 MCEMP1Q8IX19 187 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 RBMXL3Q8N7X1 1067 aaKnown RBP13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 RTL3Q8N8U3 475 aaKnown RBP13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 SH3KBP1Q96B97 665 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 SNRNP40Q96DI7 357 aaKnown RBP13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 C18orf8Q96DM3 657 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 GPR87Q9BY21 358 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 ING2Q9H160 280 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 PDFQ9HBH1 243 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 ACSS2Q9NR19 701 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 RWDD2AQ9UIY3 292 aa13.76□□□□□ -0.21
CSNK1D-211ENST00000579316 ANKUB1A6NFN9 424 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 TOX3O15405 576 aaPredicted RBP13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 KRT86O43790 486 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 EML2O95834 649 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 C9P02748 559 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 PLEKP08567 350 aaPredicted RBP13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 FGF5P12034 268 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 CCL11P51671 97 aa13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 POLR2LP62875 67 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-211ENST00000579316 CHAF1BQ13112 559 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms