RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 IVLP07476 585 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 UNGP13051 313 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 ZNF28P17035 718 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 ERCC5P28715 1186 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 DLSTP36957 453 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 CDR2Q01850 454 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 TPD52L1Q16890 204 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 RAET1GQ6H3X3 334 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 Q6ZVL8 140 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 MARK2Q7KZI7 788 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 OR10G6Q8NH81 332 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 SLC37A2Q8TED4 501 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 PDCD6IPQ8WUM4 868 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 TUBGCP2Q9BSJ2 902 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 CINPQ9BW66 212 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 GPATCH2LQ9NWQ4 482 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 ADAM22Q9P0K1 906 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 CD84Q9UIB8 345 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 KCTD3Q9Y597 815 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 PCDHB3Q9Y5E6 796 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 RPS6KL1Q9Y6S9 549 aa10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 TEP1Q99973 2627 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 RP1L1Q8IWN7 2480 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-220ENST00000576940 ARHGAP42A6NI28 874 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 SIGLEC16A6NMB1 481 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 MKRN2OSH3BPM6 223 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 PES1O00541 588 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 KATNA1O75449 491 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 MAP3K6O95382 1288 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 TNFAIP3P21580 790 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 LHCGRP22888 699 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 VIPR1P32241 457 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 STAT5AP42229 794 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 MAPK9P45984 424 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 GPR1P46091 355 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 FASLGP48023 281 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 NDST2P52849 883 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 TPI1P60174 286 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 RPL7AP62424 266 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 SLC10A7Q0GE19 358 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 NFATC2Q13469 925 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 PEX6Q13608 980 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 CAMK4Q16566 473 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 CRTC2Q53ET0 693 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 PYCR3Q53H96 274 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 ZNF787Q6DD87 383 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 WDR74Q6RFH5 385 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 TSPAN33Q86UF1 283 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 TRIM74Q86UV6 250 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 ZNF677Q86XU0 584 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 TP53INP2Q8IXH6 220 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 SFRP1Q8N474 314 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 CPT1CQ8TCG5 803 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 SSC4DQ8WTU2 575 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 DTD2Q96FN9 168 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 SCARF2Q96GP6 870 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 ZPBPQ9BS86 351 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 TRIT1Q9H3H1 467 aaKnown RBP10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 KIAA1468Q9P260 1216 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 PRKAB1Q9Y478 270 aa10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 PCYT1BQ9Y5K3 369 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-220ENST00000576940 CDC14CA4D256 554 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 DFFAO00273 331 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 FGF10O15520 208 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 DNAJB5O75953 348 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 MAN1A1P33908 653 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 KLK7P49862 253 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 ZNF143P52747 638 aaPredicted RBP10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 COPB1P53618 953 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 FOXM1Q08050 763 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 CA9Q16790 459 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 EIF2S3LQ2VIR3 472 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 TECPR1Q7Z6L1 1165 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 ARHGAP12Q8IWW6 846 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 ESX1Q8N693 406 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 EFCAB3Q8N7B9 438 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 GALNT6Q8NCL4 622 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 GALNT11Q8NCW6 608 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 SCAMP4Q969E2 229 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 SMIM14Q96QK8 99 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 OR2M4Q96R27 311 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 AGAP2Q99490 1192 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 TBC1D10AQ9BXI6 508 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 ABCG8Q9H221 673 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 VPS16Q9H269 839 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 SP110Q9HB58 689 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 CROTQ9UKG9 612 aa10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 TNRC6AQ8NDV7 1962 aaKnown RBP10.05□□□□□ -0.8
NPLOC4-220ENST00000576940 CENPEQ02224 2701 aa10.04□□□□□ -0.8
NPLOC4-220ENST00000576940 TCRBV5S1A1TA0A578 114 aa10.04□□□□□ -0.8
NPLOC4-220ENST00000576940 NPIPB15A6NHN6 443 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-220ENST00000576940 EEF2KO00418 725 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-220ENST00000576940 DAPK3O43293 454 aa10.04□□□□□ -0.8
NPLOC4-220ENST00000576940 HTRA2O43464 458 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-220ENST00000576940 ASMTLO95671 621 aa10.04□□□□□ -0.8
NPLOC4-220ENST00000576940 SOD1P00441 154 aa10.04□□□□□ -0.8
NPLOC4-220ENST00000576940 CYP2A6P11509 494 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-220ENST00000576940 CTPS1P17812 591 aa10.04□□□□□ -0.8
NPLOC4-220ENST00000576940 ERCC2P18074 760 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms