RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 RABL3Q5HYI8 236 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 TMEM110Q86TL2 294 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 SEPT8Q92599 483 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 TMEM74Q96NL1 305 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 STRA6Q9BX79 667 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 TMEM245Q9H330 911 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 TRIM39Q9HCM9 518 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 PCDH12Q9NPG4 1184 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 TLR8Q9NR97 1041 aaKnown RBP17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 PCDHB5Q9Y5E4 795 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 A0A1W2PQ67 120 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 NT5C1B-RDH14C9J2C7 533 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 CRY1Q16526 586 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 CDCA2Q69YH5 1023 aaPredicted RBP17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 ZC3HC1Q86WB0 502 aaKnown RBP17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 SYT12Q8IV01 421 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 OR10A6Q8NH74 314 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 ZFP28Q8NHY6 868 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 KCNK13Q9HB14 408 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 LSM7Q9UK45 103 aaKnown RBP17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 NENFQ9UMX5 172 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 PCDHGC4Q9Y5F7 938 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 TLL2Q9Y6L7 1015 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 MAGEB3O15480 346 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 FGF10O15520 208 aaPredicted RBP17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 RGS14O43566 566 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 EPB42P16452 691 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 UGT1A1P22309 533 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 UGT1A4P22310 534 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 UGT1A3P35503 534 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 UGT1A5P35504 534 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 MYLK3Q32MK0 819 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 C15orf39Q6ZRI6 1047 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 SETD9Q8NE22 299 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 C1orf21Q9H246 121 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 ADARB2Q9NS39 739 aaKnown RBP17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 EHD3Q9NZN3 535 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 COQ6Q9Y2Z9 468 aa17.85■□□□□ 0.45
ATPAF1-214ENST00000576409 PRR23AA6NEV1 266 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 PDZK1P1A8MUH7 402 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 MATN2O00339 956 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 NRP1O14786 923 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 PIGRP01833 764 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 DARSP14868 501 aaKnown RBP17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 ETV4P43268 484 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 STT3AP46977 705 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 POLR2JP52435 117 aaKnown RBP17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 CLCQ05315 142 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 SNX17Q15036 470 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 DGKKQ5KSL6 1271 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 SLC35F5Q8WV83 523 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 ABHD8Q96I13 439 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 ZBED2Q9BTP6 218 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 SLC39A8Q9C0K1 460 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 FBXO44Q9H4M3 255 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 TRIM17Q9Y577 477 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 NRCAMQ92823 1304 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 SCN11AQ9UI33 1791 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 TRIM24O15164 1050 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 CYBBP04839 570 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 MERTKQ12866 999 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 COX4I2Q96KJ9 171 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 MLPHQ9BV36 600 aaPredicted RBP17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 COL6A2P12110 1019 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 CD52P31358 61 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 POLD2P49005 469 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 SEMG2Q02383 582 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 DCLRE1AQ6PJP8 1040 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 AHI1Q8N157 1196 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 TMEM132CQ8N3T6 1108 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 ARFGAP1Q8N6T3 406 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 GPR156Q8NFN8 814 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 PSMG2Q969U7 264 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 KCNA7Q96RP8 456 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 GPATCH1Q9BRR8 931 aaKnown RBP17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 C20orf27Q9GZN8 174 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 AKTIPQ9H8T0 292 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 IGSF9Q9P2J2 1179 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 TMCC3Q9ULS5 477 aa17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 ARID1BQ8NFD5 2236 aaPredicted RBP17.84■□□□□ 0.45
ATPAF1-214ENST00000576409 A0A1W2PQH9 124 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 RSL1D1O76021 490 aaKnown RBP17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 CHRM5P08912 532 aaPredicted RBP17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 PRDX6P30041 224 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 DAOAP59103 153 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 POM121L1PQ3SYA9 428 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 DPY19L2P1Q6NXN4 242 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 RASAL3Q86YV0 1011 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 NKAPQ8N5F7 415 aaKnown RBP17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 KLHL23Q8NBE8 558 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 RPL10LQ96L21 214 aaKnown RBP17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 TRMOQ9BU70 441 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 PLK2Q9NYY3 685 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 RCOR3Q9P2K3 495 aaPredicted RBP17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 TOPAZ1Q8N9V7 1692 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 FAM72CH0Y354 149 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 GPC1P35052 558 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 ACSM2AQ08AH3 577 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 FAM72AQ5TYM5 149 aa17.83■□□□□ 0.45
ATPAF1-214ENST00000576409 ACSM2BQ68CK6 577 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms