RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	ASB12	Q8WXK4	309 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	RUFY1	Q96T51	708 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	TCF12	Q99081	682 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	CPNE1	Q99829	537 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	DHRS4	Q9BTZ2	278 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	SLC6A17	Q9H1V8	727 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	FAM83D	Q9H4H8	585 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	BPIFA1	Q9NP55	256 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	IL26	Q9NPH9	171 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	SMYD2	Q9NRG4	433 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	IARS2	Q9NSE4	1012 aa	Known RBP	11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	DLGAP2	Q9P1A6	1054 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	SERGEF	Q9UGK8	458 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	EBF1	Q9UH73	591 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	FKBPL	Q9UIM3	349 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZNF180	Q9UJW8	692 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	SLC30A1	Q9Y6M5	507 aa		11.87	□□□□□ -0.51
PRPF8-212	ENST00000575116	GLYATL1P3	A0A0U1RQE8	302 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	LRRC72	A6NJI9	287 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	AGAP14	A8MT82	685 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	CXorf49	A8MYA2	514 aa	Predicted RBP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	PFDN6	O15212	129 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	CD3EAP	O15446	510 aa	Known RBP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	MMP20	O60882	483 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	CDH16	O75309	829 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	SASH3	O75995	380 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	TM7SF2	O76062	418 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	SRP72	O76094	671 aa	Known RBP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	PCDH8	O95206	1070 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	SLC4A1	P02730	911 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	DCN	P07585	359 aa	Known RBP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	C6	P13671	934 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	AOC1	P19801	751 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	ITGAL	P20701	1170 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	MC4R	P32245	332 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	FOXN2	P32314	431 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	CCR3	P51677	355 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	CSE1L	P55060	971 aa	Known RBP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	RPS21	P63220	83 aa	Known RBP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	SEMG2	Q02383	582 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	CACNG1	Q06432	222 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	DPT	Q07507	201 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZNF844	Q08AG5	666 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	MTAP	Q13126	283 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	PEX6	Q13608	980 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	ITGA9	Q13797	1035 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	ACOX1	Q15067	660 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	AARS2	Q5JTZ9	985 aa	Known RBP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	GRTP1	Q5TC63	336 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	LGSN	Q5TDP6	509 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	CWF19L1	Q69YN2	538 aa	Known RBP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	ADGRD1	Q6QNK2	874 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	CERS6	Q6ZMG9	384 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116		Q6ZVL8	140 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	SNX20	Q7Z614	316 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	CTAGE3P	Q8IX95	158 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	PPM1N	Q8N819	430 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	OR2W6P	Q8NHA6	318 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZNF398	Q8TD17	642 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	DTD2	Q96FN9	168 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	PAFAH2	Q99487	392 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	TTC1	Q99614	292 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	BTBD1	Q9H0C5	482 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	CATSPERZ	Q9NTU4	200 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	TXNDC16	Q9P2K2	825 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	GGT7	Q9UJ14	662 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	ITM2B	Q9Y287	266 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	VPS9D1	Q9Y2B5	631 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	IKBKG	Q9Y6K9	419 aa		11.86	□□□□□ -0.51
PRPF8-212	ENST00000575116	SCN8A	Q9UQD0	1980 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBC1D3D	A0A087WVF3	549 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBC1D3I	A0A087WXS9	549 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBC1D3E	A0A087X179	549 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBC1D3K	A0A087X1G2	549 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TRBV5-4	A0A0C4DH59	114 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TMEM221	A6NGB7	291 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBC1D3L	B9A6J9	549 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	POC1B-GALNT4	F8VUJ3	575 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116		M0R296	226 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	CCL22	O00626	93 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	GAPDHS	O14556	408 aa	Predicted RBP	11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	LZTS3	O60299	673 aa	Predicted RBP	11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	OPA1	O60313	960 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	RECQL5	O94762	991 aa	Predicted RBP	11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	PYGL	P06737	847 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	INHBA	P08476	426 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	TBC1D3H	P0C7X1	549 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	GM2A	P17900	193 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	CNTF	P26441	200 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	GCA	P28676	217 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	HOXA6	P31267	233 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	GP5	P40197	560 aa		11.85	□□□□□ -0.51
PRPF8-212	ENST00000575116	ETV3	P41162	512 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms