RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 INPP4BO15327 924 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 STX7O15400 261 aaKnown RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 NCK1P16333 377 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 MAGEA8P43361 318 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 PSME3P61289 254 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 CDK18Q07002 472 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 PIGFQ07326 219 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 PTPRNQ16849 979 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 UGP2Q16851 508 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 SLC44A4Q53GD3 710 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 LDLRAD1Q5T700 205 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 AGAP9Q5VTM2 703 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 SMYD5Q6GMV2 418 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 Q6ZNX1 250 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 ERI1Q8IV48 349 aaKnown RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 ZBTB8BQ8NAP8 495 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 TRIB2Q92519 343 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 RMND5BQ96G75 393 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 CNDP1Q96KN2 507 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 CINPQ9BW66 212 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 GBA3Q9H227 469 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 ZNF385DQ9H6B1 395 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 TIMMDC1Q9NPL8 285 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 NDUFA13Q9P0J0 144 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 VPS28Q9UK41 221 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 SH3GLB1Q9Y371 365 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 PCDHB7Q9Y5E2 793 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 MAGED1Q9Y5V3 778 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 HS3ST4Q9Y661 456 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 TANC1Q9C0D5 1861 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 TMEM221A6NGB7 291 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 ZBTB11O95625 1053 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 ALDH2P05091 517 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 ZNF865P0CJ78 1059 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 PRKCQQ04759 706 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 USP41Q3LFD5 358 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 PKDCCQ504Y2 493 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 NHSL2Q5HYW2 709 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 PATL1Q86TB9 770 aaKnown RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 LINC00523Q86TU6 105 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 RALGPS2Q86X27 583 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 PGAM4Q8N0Y7 254 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 MYLIPQ8WY64 445 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 UPF1Q92900 1129 aaKnown RBP eCLIP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 SLC35B4Q969S0 331 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 ZNF419Q96HQ0 510 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 ZNF597Q96LX8 424 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 CCDC90BQ9GZT6 254 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 Q9H521 79 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 WDR6Q9NNW5 1121 aaKnown RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 ABCC13Q9NSE7 274 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 FAIMQ9NVQ4 179 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 TRNAU1APQ9NX07 287 aaKnown RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 SCHIP1Q9P0W5 487 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-215ENST00000575112 PCDHB9Q9Y5E1 797 aa8.52□□□□□ -1.05
RPAIN-215ENST00000575112 F5H5T6 163 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 UGT1A1P22309 533 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 UGT1A4P22310 534 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 NFKBIAP25963 317 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 UGT1A3P35503 534 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 UGT1A5P35504 534 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 NPY2RP49146 381 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 CDKN1CP49918 316 aaPredicted RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 SLC7A2P52569 658 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 TUSC3Q13454 348 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 PYCR3Q53H96 274 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ATXN7L2Q5T6C5 722 aaPredicted RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ZBTB49Q6ZSB9 765 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 CLEC14AQ86T13 490 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ZC3HC1Q86WB0 502 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 SPPL2CQ8IUH8 684 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ZC3H7AQ8IWR0 971 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 HS6ST3Q8IZP7 471 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 KDM1BQ8NB78 822 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 KLHDC9Q8NEP7 349 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 HAUS8Q9BT25 410 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 C1QTNF1Q9BXJ1 281 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ZFP14Q9HCL3 533 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 PNMA8BQ9ULN7 279 aaPredicted RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 MYRFQ9Y2G1 1151 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 SIP14410 1827 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 SH3PXD2BA1X283 911 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 UPK3BL1B0FP48 263 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 UPK3BL2E5RIL1 263 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 H3BMQ9 156 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 DPYSL4O14531 572 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 MRASO14807 208 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 MAN1A2O60476 641 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 CKMP06732 381 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 SLC35E2BP0CK96 405 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 MTHFD1P11586 935 aaKnown RBP8.51□□□□□ -1.05
RPAIN-215ENST00000575112 RENBPP51606 427 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 FPGSQ05932 587 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 PRKAA1Q13131 559 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 ACAP2Q15057 778 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 CARTPTQ16568 116 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 CCDC153Q494R4 210 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 TMTC4Q5T4D3 741 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 FBXL22Q6P050 247 aa8.51□□□□□ -1.05
RPAIN-215ENST00000575112 C16orf89Q6UX73 402 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms