RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 IGFALSP35858 605 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 CRADDP78560 199 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 CBLBQ13191 982 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 FNBP1LQ5T0N5 605 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 TSTD2Q5T7W7 516 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 HENMT1Q5T8I9 393 aaKnown RBP17.03■□□□□ 0.32
NUP88-210ENST00000574867 PDPK2PQ6A1A2 396 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 CASC4Q6P4E1 433 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 ZDHHC24Q6UX98 284 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 KYAT3Q6YP21 454 aaKnown RBP17.03■□□□□ 0.32
NUP88-210ENST00000574867 SYT12Q8IV01 421 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 GPR26Q8NDV2 337 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 C1orf216Q8TAB5 229 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 RUBCNQ92622 972 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 HINFPQ9BQA5 517 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 NAT9Q9BTE0 207 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 ZSCAN5AQ9BUG6 496 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 BPIFA1Q9NP55 256 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 GDF3Q9NR23 364 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 APPL1Q9UKG1 709 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 KCTD3Q9Y597 815 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 PCDHGA5Q9Y5G8 931 aa17.03■□□□□ 0.32
NUP88-210ENST00000574867 PRR5-ARHGAP8B1AHC4 643 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 EPN2O95208 641 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 MAOBP27338 520 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 STAT4Q14765 748 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 TRADDQ15628 312 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 GCNT7Q6ZNI0 430 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 RFLNAQ6ZTI6 216 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 CENPUQ71F23 418 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 OR13C4Q8NGS5 318 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 DNAJC1Q96KC8 554 aaKnown RBP17.02■□□□□ 0.32
NUP88-210ENST00000574867 SIGLEC10Q96LC7 697 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 SLC6A18Q96N87 628 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 MYOCQ99972 504 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 AASDHPPTQ9NRN7 309 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 PILRBQ9UKJ0 227 aa17.02■□□□□ 0.32
NUP88-210ENST00000574867 WDFY4Q6ZS81 3184 aa17.02■□□□□ 0.31
NUP88-210ENST00000574867 GOLGA8CPA6NN73 597 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 A6NNZ2 444 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 E7ESA3 106 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 H7C0S8 307 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 EIF3HO15372 352 aaKnown RBP eCLIP17.01■□□□□ 0.31
NUP88-210ENST00000574867 BCAT2O15382 392 aaPredicted RBP17.01■□□□□ 0.31
NUP88-210ENST00000574867 PCCBP05166 539 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 ACVR1Q04771 509 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 DHX9Q08211 1270 aaKnown RBP17.01■□□□□ 0.31
NUP88-210ENST00000574867 OVGP1Q12889 678 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 BBS9Q3SYG4 887 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 ALS2CLQ60I27 953 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 RAET1GQ6H3X3 334 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 ABI3BPQ7Z7G0 1075 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 IQCHQ86VS3 1027 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 CCNJLQ8IV13 435 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 MPP5Q8N3R9 675 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 TRAM1L1Q8N609 369 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 SCAMP4Q969E2 229 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 STAMBPL1Q96FJ0 436 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 RIOK2Q9BVS4 552 aaKnown RBP17.01■□□□□ 0.31
NUP88-210ENST00000574867 TM9SF3Q9HD45 589 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 MBNL1Q9NR56 388 aaKnown RBP17.01■□□□□ 0.31
NUP88-210ENST00000574867 CHRAC1Q9NRG0 131 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 ZDHHC18Q9NUE0 388 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 MTRF1LQ9UGC7 380 aaKnown RBP17.01■□□□□ 0.31
NUP88-210ENST00000574867 MAD1L1Q9Y6D9 718 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 ATXN2Q99700 1313 aaKnown RBP17.01■□□□□ 0.31
NUP88-210ENST00000574867 GLYATL1P3A0A0U1RQE8 302 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 A0A1B0GTW7 788 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 FAM237BA0A1B0GVD1 139 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 AFF3P51826 1226 aaKnown RBP17.01■□□□□ 0.31
NUP88-210ENST00000574867 HLTFQ14527 1009 aaKnown RBP eCLIP17.01■□□□□ 0.31
NUP88-210ENST00000574867 LPAL2Q16609 132 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 PNCKQ6P2M8 343 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 CEP128Q6ZU80 1094 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 OR13J1Q8NGT2 312 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 SPATA16Q9BXB7 569 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 IL26Q9NPH9 171 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 RRAGDQ9NQL2 400 aaPredicted RBP17.01■□□□□ 0.31
NUP88-210ENST00000574867 TREX1Q9NSU2 369 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 FKBPLQ9UIM3 349 aa17.01■□□□□ 0.31
NUP88-210ENST00000574867 PGAM1P18669 254 aa17■□□□□ 0.31
NUP88-210ENST00000574867 CD38P28907 300 aa17■□□□□ 0.31
NUP88-210ENST00000574867 GPR1P46091 355 aa17■□□□□ 0.31
NUP88-210ENST00000574867 RABIFP47224 123 aa17■□□□□ 0.31
NUP88-210ENST00000574867 ITGA9Q13797 1035 aa17■□□□□ 0.31
NUP88-210ENST00000574867 PTPRCAPQ14761 206 aa17■□□□□ 0.31
NUP88-210ENST00000574867 TEAD4Q15561 434 aa17■□□□□ 0.31
NUP88-210ENST00000574867 MSS51Q4VC12 460 aa17■□□□□ 0.31
NUP88-210ENST00000574867 ADAMTSL4Q6UY14 1074 aa17■□□□□ 0.31
NUP88-210ENST00000574867 AGGF1Q8N302 714 aaeCLIP17■□□□□ 0.31
NUP88-210ENST00000574867 MFSD2AQ8NA29 543 aa17■□□□□ 0.31
NUP88-210ENST00000574867 SUMF1Q8NBK3 374 aa17■□□□□ 0.31
NUP88-210ENST00000574867 CEP76Q8TAP6 659 aa17■□□□□ 0.31
NUP88-210ENST00000574867 IFT81Q8WYA0 676 aa17■□□□□ 0.31
NUP88-210ENST00000574867 PIGKQ92643 395 aa17■□□□□ 0.31
NUP88-210ENST00000574867 SKA1Q96BD8 255 aa17■□□□□ 0.31
NUP88-210ENST00000574867 EBNA1BP2Q99848 306 aaKnown RBP17■□□□□ 0.31
NUP88-210ENST00000574867 TSPYL1Q9H0U9 437 aa17■□□□□ 0.31
NUP88-210ENST00000574867 WDR26Q9H7D7 661 aa17■□□□□ 0.31
NUP88-210ENST00000574867 FNDC3AQ9Y2H6 1198 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms