RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 LINC00032P0C843 101 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 RPL9P32969 192 aaKnown RBP19.03■□□□□ 0.64
SCARF1-206ENST00000573852 CCT8P50990 548 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 SCNN1BP51168 640 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 ATP6AP1Q15904 470 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 MARC1Q5VT66 337 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 KANK2Q63ZY3 851 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 GPR180Q86V85 440 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 BRI3BPQ8WY22 251 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 C12orf43Q96C57 262 aaKnown RBP19.03■□□□□ 0.64
SCARF1-206ENST00000573852 TUBGCP3Q96CW5 907 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 ZFC3H1O60293 1989 aaKnown RBP19.03■□□□□ 0.64
SCARF1-206ENST00000573852 H3BMM5 538 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 MTHFD1P11586 935 aaKnown RBP19.03■□□□□ 0.64
SCARF1-206ENST00000573852 HGFP14210 728 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 BNIP2Q12982 314 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 METTL23Q86XA0 190 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 ADAMTS16Q8TE57 1224 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 CENPNQ96H22 339 aaPredicted RBP19.03■□□□□ 0.64
SCARF1-206ENST00000573852 FBXL20Q96IG2 436 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 AGO3Q9H9G7 860 aaKnown RBP19.03■□□□□ 0.64
SCARF1-206ENST00000573852 SDR39U1Q9NRG7 319 aaPredicted RBP19.03■□□□□ 0.64
SCARF1-206ENST00000573852 UXTQ9UBK9 157 aaPredicted RBP19.03■□□□□ 0.64
SCARF1-206ENST00000573852 POLG2Q9UHN1 485 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 PTBP2Q9UKA9 531 aaKnown RBP19.03■□□□□ 0.64
SCARF1-206ENST00000573852 TRIM64A6NGJ6 449 aa19.02■□□□□ 0.64
SCARF1-206ENST00000573852 GJB3O75712 270 aa19.02■□□□□ 0.64
SCARF1-206ENST00000573852 ESRRGP62508 458 aa19.02■□□□□ 0.64
SCARF1-206ENST00000573852 CYGBQ8WWM9 190 aa19.02■□□□□ 0.64
SCARF1-206ENST00000573852 C9orf16Q9BUW7 83 aa19.02■□□□□ 0.64
SCARF1-206ENST00000573852 FLRT1Q9NZU1 646 aa19.02■□□□□ 0.64
SCARF1-206ENST00000573852 PCDHA9Q9Y5H5 950 aa19.02■□□□□ 0.64
SCARF1-206ENST00000573852 PTPRDP23468 1912 aa19.02■□□□□ 0.64
SCARF1-206ENST00000573852 WASH4PA8MWX3 477 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 TMX2-CTNND1H3BSU7 103 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 TNFRSF10BO14763 440 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 MATN4O95460 622 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 POMCP01189 267 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 SLC2A3P11169 496 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 GFAPP14136 432 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 ENTPD1P49961 510 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 DIO3P55073 304 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 SEMA3AQ14563 771 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 DUS1LQ6P1R4 473 aaKnown RBP19.02■□□□□ 0.63
SCARF1-206ENST00000573852 CD300LGQ6UXG3 332 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 SPRED1Q7Z699 444 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 UMODL1-AS1Q8N2C9 162 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 TRPV3Q8NET8 790 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 TNIP2Q8NFZ5 429 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.02■□□□□ 0.63
SCARF1-206ENST00000573852 DCUN1D5Q9BTE7 237 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 NPLQ9BXD5 320 aaPredicted RBP19.02■□□□□ 0.63
SCARF1-206ENST00000573852 GID8Q9NWU2 228 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 DOCK3Q8IZD9 2030 aa19.02■□□□□ 0.63
SCARF1-206ENST00000573852 A0A1W2PQH9 124 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 CNTN5O94779 1100 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 ATXN1LP0C7T5 689 aaKnown RBP19.01■□□□□ 0.63
SCARF1-206ENST00000573852 ZNF865P0CJ78 1059 aaPredicted RBP19.01■□□□□ 0.63
SCARF1-206ENST00000573852 LBPP18428 481 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 NUP107P57740 925 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 ECT2LQ008S8 904 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 BLOC1S3Q6QNY0 202 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 CPNE9Q8IYJ1 553 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 PGBD5Q8N414 524 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 GFM2Q969S9 779 aaKnown RBP19.01■□□□□ 0.63
SCARF1-206ENST00000573852 PSMG2Q969U7 264 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 OSBPL6Q9BZF3 934 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 RNF181Q9P0P0 153 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 NLRC5Q86WI3 1866 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 GOT2P00505 430 aaKnown RBP19.01■□□□□ 0.63
SCARF1-206ENST00000573852 SOX11P35716 441 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 GRIK1P39086 918 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 MRPS6P82932 125 aaKnown RBP19.01■□□□□ 0.63
SCARF1-206ENST00000573852 RPS6KA2Q15349 733 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 ALFQ53S48 1182 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 FBXO48Q5FWF7 155 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 RABL3Q5HYI8 236 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 LYSMD3Q7Z3D4 306 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 IFNEQ86WN2 208 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 OFCC1Q8IZS5 231 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 ARRDC2Q8TBH0 407 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 DNAJB14Q8TBM8 379 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 FNDC8Q8TC99 324 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 TMEM125Q96AQ2 219 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 ASB2Q96Q27 587 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 ATOH8Q96SQ7 321 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 FAF1Q9UNN5 650 aaPredicted RBP19.01■□□□□ 0.63
SCARF1-206ENST00000573852 ARL5AQ9Y689 179 aa19.01■□□□□ 0.63
SCARF1-206ENST00000573852 EI24O14681 340 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 INPP4BO15327 924 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 RASAL1O95294 804 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 CYP11A1P05108 521 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 CTSHP09668 335 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 NCK1P16333 377 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 ZNF37AP17032 561 aaPredicted RBP19■□□□□ 0.63
SCARF1-206ENST00000573852 NRG1Q02297 640 aaPredicted RBP19■□□□□ 0.63
SCARF1-206ENST00000573852 CYP51A1Q16850 503 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 RAB44Q7Z6P3 723 aaPredicted RBP19■□□□□ 0.63
SCARF1-206ENST00000573852 BBS5Q8N3I7 341 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 GOLM1Q8NBJ4 401 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms