RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 AK4P27144 223 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 ACTR1BP42025 376 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 CD86P42081 329 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 ARHGAP25P42331 645 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 POLD2P49005 469 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 PDX1P52945 283 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 UCNP55089 124 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 MAZP56270 477 aaKnown RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 TMPRSS3P57727 454 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 ACTR1AP61163 376 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 DYNLT1P63172 113 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 PEX6Q13608 980 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 COL9A2Q14055 689 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 ASTE1Q2TB18 679 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 SOWAHCQ53LP3 525 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 CERCAMQ5T4B2 595 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 ALG1LQ6GMV1 187 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 MARK2Q7KZI7 788 aaKnown RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 RAB11FIP2Q7L804 512 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 SPRED1Q7Z699 444 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 B3GNT8Q7Z7M8 397 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 TRIM74Q86UV6 250 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 SFTPA2Q8IWL1 248 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 FBXO39Q8N4B4 442 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 PQLC3Q8N755 202 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 SCAMP4Q969E2 229 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 CCDC97Q96F63 343 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 LIN37Q96GY3 246 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 SLC46A1Q96NT5 459 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 TSGA13Q96PP4 275 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 RNF157Q96PX1 679 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 SMIM14Q96QK8 99 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 OR2M4Q96R27 311 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 UBL7Q96S82 380 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 CEP41Q9BYV8 373 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 ABCG8Q9H221 673 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 TAAR2Q9P1P5 351 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 ATXN7L1Q9ULK2 861 aaPredicted RBP9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 PPIL1Q9Y3C6 166 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 PCDHGA8Q9Y5G5 932 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 RNF215Q9Y6U7 377 aa9.62□□□□□ -0.87
NPLOC4-212ENST00000573328 ATRXP46100 2492 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 A0A1W2PNU3 283 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 A0A1W2PQM1 296 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 PMS2P1A4D2B8 440 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 PLD2O14939 933 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 ZW10O43264 779 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 NUDT21O43809 227 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 CLDN7O95471 211 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 IVLP07476 585 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 ITGA2BP08514 1039 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 HGFP14210 728 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 ZFXP17010 805 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 TEAD1P28347 426 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 ADCY8P40145 1251 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 NOP2P46087 812 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 STC1P52823 247 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 CTBSQ01459 385 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 DPTQ07507 201 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 PPIDQ08752 370 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 NIPAL4Q0D2K0 466 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 SLC10A2Q12908 348 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 ZBTB17Q13105 803 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 EIF3IQ13347 325 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 GALNT3Q14435 633 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 HLTFQ14527 1009 aaKnown RBP eCLIP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 PDK1Q15118 436 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 PCSK7Q16549 785 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 AMZ1Q400G9 498 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 PHF19Q5T6S3 580 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 NPNTQ6UXI9 565 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 ADAMTSL4Q6UY14 1074 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 RFLNAQ6ZTI6 216 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 ZNF765Q7L2R6 523 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 GPR155Q7Z3F1 870 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 TECPR1Q7Z6L1 1165 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 GALNT13Q8IUC8 556 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 RHOT1Q8IXI2 618 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 PLD5Q8N7P1 536 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 ARRDC2Q8TBH0 407 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 CCHCR1Q8TD31 782 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 GPBAR1Q8TDU6 330 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 FATE1Q969F0 183 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 HIC2Q96JB3 615 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 MLPHQ9BV36 600 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 RIOK2Q9BVS4 552 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 ADGRE3Q9BY15 652 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 TRIM5Q9C035 493 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 PRORYQ9H606 182 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 SPATS2LQ9NUQ6 558 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 TRNAU1APQ9NX07 287 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 DDX56Q9NY93 547 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 PKD2L2Q9NZM6 624 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 PISDQ9UG56 409 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 APPL1Q9UKG1 709 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 TMEM98Q9Y2Y6 226 aa9.61□□□□□ -0.87
NPLOC4-212ENST00000573328 HYOU1Q9Y4L1 999 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms