RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 CA4P22748 312 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 KELP23276 732 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 CD86P42081 329 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 LSSP48449 732 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 PDK1Q15118 436 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 PRKD1Q15139 912 aaPredicted RBP17.25■□□□□ 0.35
SMG6-212ENST00000573153 SLC14A2Q15849 920 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 CERCAMQ5T4B2 595 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 ADAMTSL4Q6UY14 1074 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 TMPRSS9Q7Z410 1059 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 KATNAL2Q8IYT4 538 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 NDUFAF2Q8N183 169 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 CCNYQ8ND76 341 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.25■□□□□ 0.35
SMG6-212ENST00000573153 IMP4Q96G21 291 aaKnown RBP17.25■□□□□ 0.35
SMG6-212ENST00000573153 BBC3Q96PG8 261 aaPredicted RBP17.25■□□□□ 0.35
SMG6-212ENST00000573153 HERPUD2Q9BSE4 406 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 PCDH9Q9HC56 1237 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 DNPEPQ9ULA0 475 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 SUFUQ9UMX1 484 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 SSUH2Q9Y2M2 353 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 REXO2Q9Y3B8 237 aaKnown RBP17.25■□□□□ 0.35
SMG6-212ENST00000573153 PLEKHM1Q9Y4G2 1056 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 EPN1Q9Y6I3 576 aaPredicted RBP17.25■□□□□ 0.35
SMG6-212ENST00000573153 SCN8AQ9UQD0 1980 aa17.25■□□□□ 0.35
SMG6-212ENST00000573153 PPP1R12AO14974 1030 aaPredicted RBP17.24■□□□□ 0.35
SMG6-212ENST00000573153 NDUFA10O95299 355 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 IVLP07476 585 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 AK4P27144 223 aaPredicted RBP17.24■□□□□ 0.35
SMG6-212ENST00000573153 NR2C2P49116 596 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 RPIAP49247 311 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 GABREP78334 506 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 ITKQ08881 620 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 ARHGEF7Q14155 803 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 HENMT1Q5T8I9 393 aaKnown RBP17.24■□□□□ 0.35
SMG6-212ENST00000573153 RAET1GQ6H3X3 334 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 RBM44Q6ZP01 1051 aaKnown RBP17.24■□□□□ 0.35
SMG6-212ENST00000573153 ZNF438Q7Z4V0 828 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 TRIM74Q86UV6 250 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 LPCAT1Q8NF37 534 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 FGF11Q92914 225 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 GLMNQ92990 594 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 POLR1BQ9H9Y6 1135 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 PHPT1Q9NRX4 125 aaPredicted RBP17.24■□□□□ 0.35
SMG6-212ENST00000573153 SAE1Q9UBE0 346 aaPredicted RBP17.24■□□□□ 0.35
SMG6-212ENST00000573153 GULP1Q9UBP9 304 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 APPL1Q9UKG1 709 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 SATB2Q9UPW6 733 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 HEY1Q9Y5J3 304 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 RNF215Q9Y6U7 377 aa17.24■□□□□ 0.35
SMG6-212ENST00000573153 SOWAHDA6NJG2 315 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 FADS2P1A8MWK0 482 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 D6RAR5 112 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 PDE2AO00408 941 aaPredicted RBP17.23■□□□□ 0.35
SMG6-212ENST00000573153 FGF1P05230 155 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 CD68P34810 354 aaPredicted RBP17.23■□□□□ 0.35
SMG6-212ENST00000573153 CCL7P80098 99 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 WASHC5Q12768 1159 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 TFDP2Q14188 446 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 NR1D2Q14995 579 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 C14orf28Q4W4Y0 310 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 ODF2Q5BJF6 829 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 BZW1Q7L1Q6 419 aaKnown RBP17.23■□□□□ 0.35
SMG6-212ENST00000573153 RFX6Q8HWS3 928 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 PATE1Q8WXA2 126 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 KRT35Q92764 455 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 AP2M1Q96CW1 435 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 PRORYQ9H606 182 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 CARS2Q9HA77 564 aaKnown RBP17.23■□□□□ 0.35
SMG6-212ENST00000573153 TRNAU1APQ9NX07 287 aaKnown RBP17.23■□□□□ 0.35
SMG6-212ENST00000573153 TTLL3Q9Y4R7 772 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 PCDHGA8Q9Y5G5 932 aa17.23■□□□□ 0.35
SMG6-212ENST00000573153 OAS3Q9Y6K5 1087 aaKnown RBP17.23■□□□□ 0.35
SMG6-212ENST00000573153 hCG_1818297A0A087WSY0 165 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 CDRT15L2A8MXV6 281 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 ANKRD66B4E2M5 251 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 DNAJC6O75061 913 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 GLB1P16278 677 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 PTPN3P26045 913 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 CDC25BP30305 580 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 MAZP56270 477 aaKnown RBP17.22■□□□□ 0.35
SMG6-212ENST00000573153 DYNLT1P63172 113 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 B4GALNT1Q00973 533 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 SOWAHCQ53LP3 525 aaPredicted RBP17.22■□□□□ 0.35
SMG6-212ENST00000573153 TFDP3Q5H9I0 405 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 C3orf38Q5JPI3 329 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 SPOCD1Q6ZMY3 1216 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 SPRED1Q7Z699 444 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 TAF8Q7Z7C8 310 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 NAGSQ8N159 534 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 FAM46DQ8NEK8 389 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 EXD1Q8NHP7 514 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 ZNF578Q96N58 590 aaPredicted RBP17.22■□□□□ 0.35
SMG6-212ENST00000573153 DCBLD2Q96PD2 775 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 RIOK2Q9BVS4 552 aaKnown RBP17.22■□□□□ 0.35
SMG6-212ENST00000573153 ABCG4Q9H172 646 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 TAAR2Q9P1P5 351 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 DOLKQ9UPQ8 538 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 TMEM98Q9Y2Y6 226 aa17.22■□□□□ 0.35
SMG6-212ENST00000573153 B4DGG1 531 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms