RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 AQP9O43315 295 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 NEBLO76041 1014 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 RECQL5O94762 991 aaPredicted RBP7.46□□□□□ -1.22
NUP88-205ENST00000572809 CAPNS1P04632 268 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 CR2P20023 1033 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 KDELR1P24390 212 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 CCNCP24863 283 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 HNF1BP35680 557 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 MMP12P39900 470 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 MMP13P45452 471 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 BLKP51451 505 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 DUSP3P51452 185 aaPredicted RBP7.46□□□□□ -1.22
NUP88-205ENST00000572809 MAXP61244 160 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 GPLD1P80108 840 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 PPARDQ03181 441 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 ITKQ08881 620 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 TBX2Q13207 712 aaPredicted RBP7.46□□□□□ -1.22
NUP88-205ENST00000572809 LRP8Q14114 963 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 INPP5AQ14642 412 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 PAFAH1B3Q15102 231 aaKnown RBP7.46□□□□□ -1.22
NUP88-205ENST00000572809 IRF4Q15306 451 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 RALGPS1Q5JS13 557 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 FAXCQ5TGI0 409 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 NCBP2-AS2Q69YL0 99 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 ENPP7Q6UWV6 458 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 LIPIQ6XZB0 460 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 SYT9Q86SS6 491 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 CCNJLQ8IV13 435 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 RHOT2Q8IXI1 618 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 PGBD5Q8N414 524 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 FAM181AQ8N9Y4 354 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 LMX1AQ8TE12 382 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 PDCD6IPQ8WUM4 868 aaKnown RBP7.46□□□□□ -1.22
NUP88-205ENST00000572809 APOLD1Q96LR9 279 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 RNF157Q96PX1 679 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 IL12RB2Q99665 862 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 ZNF670Q9BS34 389 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 APOOQ9BUR5 198 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 RSRP1Q9BUV0 290 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 CCDC86Q9H6F5 360 aaKnown RBP7.46□□□□□ -1.22
NUP88-205ENST00000572809 NOD2Q9HC29 1040 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 NT5MQ9NPB1 228 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 SPASTQ9UBP0 616 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 PHTF1Q9UMS5 762 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 PLXNB3Q9ULL4 1909 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 CEP295Q9C0D2 2601 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 TDRD6O60522 2096 aaKnown RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 ELOA3CA0A087WX78 387 aaPredicted RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 ELOA3DA6NLF2 546 aaPredicted RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 SRRM3A6NNA2 597 aaPredicted RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 TAF4O00268 1085 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 TPP1O14773 563 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 HTRA2O43464 458 aaPredicted RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 SOCS5O75159 536 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 MTA2O94776 668 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 ELFN1P0C7U0 828 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 CKMT1AP12532 417 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 ALAS2P22557 587 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 NFKBIAP25963 317 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 HTR1BP28222 390 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 MAN1A1P33908 653 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 GARSP41250 739 aaKnown RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 CLDN6P56747 220 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 SLC10A2Q12908 348 aaPredicted RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 RALGDSQ12967 914 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 TARDBPQ13148 414 aaKnown RBP eCLIP7.45□□□□□ -1.22
NUP88-205ENST00000572809 MTM1Q13496 603 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 C1orf61Q13536 156 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 ACOX1Q15067 660 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 IFI16Q16666 785 aaKnown RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 ELOA3BQ3SY89 546 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 ARMC12Q5T9G4 340 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 TIGD7Q6NT04 549 aaPredicted RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 ZCCHC8Q6NZY4 707 aaKnown RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 SARM1Q6SZW1 724 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 MACC1Q6ZN28 852 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 DPPA4Q7L190 304 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 RD3Q7Z3Z2 195 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 PHACTR4Q8IZ21 702 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 NDUFAF2Q8N183 169 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 CACTIN-AS1Q8N1I8 211 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 TEX26Q8N6G2 289 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 TMEM102Q8N9M5 508 aaPredicted RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 CCNYQ8ND76 341 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 ZNF548Q8NEK5 533 aaPredicted RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 ELOA3Q8NG57 546 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 MDM1Q8TC05 714 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 RAPGEF5Q92565 580 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 TSACCQ96A04 125 aaPredicted RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 FAF2Q96CS3 445 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 SCRN2Q96FV2 425 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 NSUN5Q96P11 429 aaKnown RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 TSGA13Q96PP4 275 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 TCF12Q99081 682 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 MGME1Q9BQP7 344 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 MAK16Q9BXY0 300 aaKnown RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 SLC13A1Q9BZW2 595 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 TCEAL2Q9H3H9 227 aaPredicted RBP7.45□□□□□ -1.22
NUP88-205ENST00000572809 ACBD3Q9H3P7 528 aa7.45□□□□□ -1.22
NUP88-205ENST00000572809 USP29Q9HBJ7 922 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms