RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 CER1O95813 267 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 EPOP01588 193 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 ADRB1P08588 477 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 ZNF30P17039 623 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 CA4P22748 312 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 POLD2P49005 469 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 CCT8P50990 548 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 ATXN3P54252 364 aaPredicted RBP6.96□□□□□ -1.3
SMG6-209ENST00000571442 TERF1P54274 439 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 CDK3Q00526 305 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 OVGP1Q12889 678 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 C1orf61Q13536 156 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 NFATC4Q14934 902 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 P3H1Q32P28 736 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 KHDC1Q4VXA5 237 aaKnown RBP6.96□□□□□ -1.3
SMG6-209ENST00000571442 ANKRD22Q5VYY1 191 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 ITPRIPL1Q6GPH6 555 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 RAET1GQ6H3X3 334 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 IL27RAQ6UWB1 636 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 ENPP7Q6UWV6 458 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 MACC1Q6ZN28 852 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 ARHGEF18Q6ZSZ5 1173 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 ZNF534Q76KX8 674 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 HEATR4Q86WZ0 1026 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 PNPLA1Q8N8W4 532 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 OR52K1Q8NGK4 314 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 CCL4L1Q8NHW4 92 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 BAHD1Q8TBE0 780 aaPredicted RBP6.96□□□□□ -1.3
SMG6-209ENST00000571442 BLOC1S5Q8TDH9 187 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 AP2M1Q96CW1 435 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 CCDC97Q96F63 343 aaPredicted RBP6.96□□□□□ -1.3
SMG6-209ENST00000571442 NAPGQ99747 312 aaPredicted RBP6.96□□□□□ -1.3
SMG6-209ENST00000571442 TBL1YQ9BQ87 522 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 TEX101Q9BY14 249 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 ADGRE3Q9BY15 652 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 FRMD8Q9BZ67 464 aaPredicted RBP6.96□□□□□ -1.3
SMG6-209ENST00000571442 FRMD8P1Q9BZ68 369 aaPredicted RBP6.96□□□□□ -1.3
SMG6-209ENST00000571442 CLPBQ9H078 707 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 ERVMER34-1Q9H9K5 563 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 ZFYVE1Q9HBF4 777 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 DNAJC28Q9NX36 388 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 TOR4AQ9NXH8 423 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 IL17CQ9P0M4 197 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 DRG1Q9Y295 367 aaKnown RBP6.96□□□□□ -1.3
SMG6-209ENST00000571442 PLEKHM1Q9Y4G2 1056 aa6.96□□□□□ -1.3
SMG6-209ENST00000571442 ZFC3H1O60293 1989 aaKnown RBP6.96□□□□□ -1.3
SMG6-209ENST00000571442 ARHGEF17Q96PE2 2063 aaPredicted RBP6.96□□□□□ -1.3
SMG6-209ENST00000571442 CACNA1GO43497 2377 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 COL5A1P20908 1838 aaPredicted RBP6.95□□□□□ -1.3
SMG6-209ENST00000571442 LY6G6EA0A0G2JKS1 128 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 SPAARA0A1B0GVQ0 90 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 CCDC78A2IDD5 438 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 GOLGA6CA6NDK9 693 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 GOLGA6BA6NDN3 693 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 PGRMC1O00264 195 aaKnown RBP6.95□□□□□ -1.3
SMG6-209ENST00000571442 CES2O00748 559 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 LDB2O43679 373 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 PCDHGA12O60330 932 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 MTX2O75431 263 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 ANXA9O76027 345 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 STK10O94804 968 aaKnown RBP6.95□□□□□ -1.3
SMG6-209ENST00000571442 KCNK5O95279 499 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 TOP3BO95985 862 aaKnown RBP6.95□□□□□ -1.3
SMG6-209ENST00000571442 CSF2P04141 144 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 FGF1P05230 155 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 CEACAM5P06731 702 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 ZNF883P0CG24 379 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 GOLGA6DP0CG33 693 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 PRSS56P0CW18 603 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 NME1P15531 152 aaKnown RBP6.95□□□□□ -1.3
SMG6-209ENST00000571442 JUNDP17535 347 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 HLA-DPA1P20036 260 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 DGKAP23743 735 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 STIP1P31948 543 aaKnown RBP6.95□□□□□ -1.3
SMG6-209ENST00000571442 COILP38432 576 aaPredicted RBP6.95□□□□□ -1.3
SMG6-209ENST00000571442 PTGIRP43119 386 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 GPR1P46091 355 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 VPS41P49754 854 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 ZNF140P52738 457 aaPredicted RBP6.95□□□□□ -1.3
SMG6-209ENST00000571442 KIAA1024LP59773 190 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 YPEL5P62699 121 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 MRPS25P82663 173 aaKnown RBP6.95□□□□□ -1.3
SMG6-209ENST00000571442 DPTQ07507 201 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 SEMA5AQ13591 1074 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 PSAPL1Q6NUJ1 521 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 ADAMTSL4Q6UY14 1074 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 SYT10Q6XYQ8 523 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 ZNF765Q7L2R6 523 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 RD3Q7Z3Z2 195 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 GLT6D1Q7Z4J2 308 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 PARGQ86W56 976 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 NAXDQ8IW45 347 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 PHACTR4Q8IZ21 702 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 NRSN1Q8IZ57 195 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 NDUFAF2Q8N183 169 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 ZNF548Q8NEK5 533 aaPredicted RBP6.95□□□□□ -1.3
SMG6-209ENST00000571442 OR13C4Q8NGS5 318 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 NAT14Q8WUY8 206 aa6.95□□□□□ -1.3
SMG6-209ENST00000571442 MAGOHBQ96A72 148 aaKnown RBP6.95□□□□□ -1.3
SMG6-209ENST00000571442 COX14Q96I36 57 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms