RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 TTPAP49638 278 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 ARL4DP49703 201 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 ZNF846Q147U1 533 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 LDLRAP1Q5SW96 308 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 USP50Q70EL3 339 aaPredicted RBP11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 PLD6Q8N2A8 252 aaKnown RBP11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 DCBLD1Q8N8Z6 715 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 PPTC7Q8NI37 304 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 PSMA8Q8TAA3 256 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 SLC35F5Q8WV83 523 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 MTFMTQ96DP5 389 aaKnown RBP11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 CIDEBQ9UHD4 219 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 IPPQ9Y573 584 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 NFKBIEO00221 500 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 C22orf31O95567 290 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 ALDH2P05091 517 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 NR4A1P22736 598 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 RRM2P31350 389 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 SLC1A2P43004 574 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 ETV4P43268 484 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 DAOAP59103 153 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 TNFAIP8L3Q5GJ75 292 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 CDCA2Q69YH5 1023 aaPredicted RBP11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 CNSTQ6PJW8 725 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 TXNDC11Q6PKC3 985 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 CRTC3Q6UUV7 619 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 THAP5Q7Z6K1 395 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 AMER2Q8N7J2 671 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 FBXO27Q8NI29 283 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 OLIG1Q8TAK6 271 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 ZHX1-C8orf76Q96EF9 292 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 AGO3Q9H9G7 860 aaKnown RBP11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 G3V2T6 193 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 ASLP04424 464 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 CHRNA4P43681 627 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 GALNT18Q6P9A2 607 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 ZNF549Q6P9A3 640 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 AFTPHQ6ULP2 937 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 SPATA19Q7Z5L4 167 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 POC5Q8NA72 575 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 HM13Q8TCT9 377 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 SLC39A3Q9BRY0 314 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 TMEM165Q9HC07 324 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 TRNAU1APQ9NX07 287 aaKnown RBP11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 FBXW11Q9UKB1 542 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 ANKRD12Q6UB98 2062 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 COL2A1P02458 1487 aaPredicted RBP11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 PDLIM1O00151 329 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 KRT20P35900 424 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 TRAP1Q12931 704 aaKnown RBP11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 ZC3HC1Q86WB0 502 aaKnown RBP11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 S100ZQ8WXG8 99 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 MTERF3Q96E29 417 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 LINGO1Q96FE5 620 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 MAF1Q9H063 256 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 SYNDIG1Q9H7V2 258 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 HMX1Q9NP08 348 aaPredicted RBP11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 MKS1Q9NXB0 559 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 ARL15Q9NXU5 204 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 KANSL3Q9P2N6 904 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 ADGRE2Q9UHX3 823 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 CYTH4Q9UIA0 394 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 TDRKHQ9Y2W6 561 aaKnown RBP11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 TRPV2Q9Y5S1 764 aa11.11□□□□□ -0.63
PCDHGA4-201ENST00000571252 SF3B1O75533 1304 aaKnown RBP eCLIP11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 MYO18AQ92614 2054 aaKnown RBP11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 HNRNPCL2B2RXH8 293 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 PIP5K1BO14986 540 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 FAM189A1O60320 539 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 ATP6V1G1O75348 118 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 BCAS2O75934 225 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 ABCB1P08183 1280 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 THRBP10828 461 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 NCK1P16333 377 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 POLR2JP52435 117 aaKnown RBP11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 RHDQ02161 417 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 HIST2H2ACQ16777 129 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 RFX4Q33E94 735 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 PRAMEF19Q5SWL8 479 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 HIST2H2AA3Q6FI13 130 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 TMEM214Q6NUQ4 689 aaKnown RBP11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 KCTD8Q6ZWB6 473 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 SNX27Q96L92 541 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 NUAK2Q9H093 628 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 EPB41L1Q9H4G0 881 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 ZBTB26Q9HCK0 441 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 BPIFA1Q9NP55 256 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 PIGVQ9NUD9 493 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 ZNHIT2Q9UHR6 403 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 CAB39Q9Y376 341 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 MFHAS1Q9Y4C4 1052 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 TRIM17Q9Y577 477 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 DGKBQ9Y6T7 804 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 COL1A2P08123 1366 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 EI24O14681 340 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 MATN3O15232 486 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 DHRS4L1P0CG22 281 aa11.1□□□□□ -0.63
PCDHGA4-201ENST00000571252 MBL2P11226 248 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms