RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 MAGEE1Q9HCI5 957 aa12.64□□□□□ -0.39
TVP23B-204ENST00000571018 FGF22Q9HCT0 170 aa12.64□□□□□ -0.39
TVP23B-204ENST00000571018 PHPT1Q9NRX4 125 aaPredicted RBP12.64□□□□□ -0.39
TVP23B-204ENST00000571018 KLHL8Q9P2G9 620 aaPredicted RBP12.64□□□□□ -0.39
TVP23B-204ENST00000571018 FAM153AQ9UHL3 310 aa12.64□□□□□ -0.39
TVP23B-204ENST00000571018 CD84Q9UIB8 345 aa12.64□□□□□ -0.39
TVP23B-204ENST00000571018 GUCA1BQ9UMX6 200 aa12.64□□□□□ -0.39
TVP23B-204ENST00000571018 LY6G6EA0A0G2JKS1 128 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 C1orf232A0A0U1RR37 186 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 LOC285095A0A1B0GVY8 99 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 PMPCBO75439 489 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 NDST3O95803 873 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 SOD1P00441 154 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 EPOP01588 193 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 PYGLP06737 847 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 ANXA6P08133 673 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 CCDC175P0C221 793 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 RBP3P10745 1247 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 GPR1P46091 355 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 SPINT3P49223 89 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 DUSP3P51452 185 aaPredicted RBP12.63□□□□□ -0.39
TVP23B-204ENST00000571018 EIF3EP60228 445 aaKnown RBP12.63□□□□□ -0.39
TVP23B-204ENST00000571018 CCZ1BP86790 482 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 CCZ1P86791 482 aaPredicted RBP12.63□□□□□ -0.39
TVP23B-204ENST00000571018 CDK3Q00526 305 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 C6orf132Q5T0Z8 1188 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 RAET1GQ6H3X3 334 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 CCDC70Q6NSX1 233 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 LVRNQ6Q4G3 990 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 KDELC1Q6UW63 502 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 ADAMTSL4Q6UY14 1074 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 CCNI2Q6ZMN8 369 aaPredicted RBP12.63□□□□□ -0.39
TVP23B-204ENST00000571018 CDKL3Q8IVW4 592 aaPredicted RBP12.63□□□□□ -0.39
TVP23B-204ENST00000571018 CCHCR1Q8TD31 782 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 GATA6Q92908 595 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 SCAMP4Q969E2 229 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 WDR24Q96S15 920 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 FERMT1Q9BQL6 677 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 BOCQ9BWV1 1114 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 C10orf88Q9H8K7 445 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 GRPEL1Q9HAV7 217 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 ZFYVE1Q9HBF4 777 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 MRPL40Q9NQ50 206 aaKnown RBP12.63□□□□□ -0.39
TVP23B-204ENST00000571018 EVA1BQ9NVM1 165 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 UBP1Q9NZI7 540 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 NCKIPSDQ9NZQ3 722 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 U3KQA8 63 aa12.63□□□□□ -0.39
TVP23B-204ENST00000571018 PRSS38A1L453 326 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 RGSL1A5PLK6 1076 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 GOLGA6CA6NDK9 693 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 GOLGA6BA6NDN3 693 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 GOLGA6L9A6NEM1 432 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 C1QTNF9BB2RNN3 333 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 MAP3K7O43318 606 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 CEACAM5P06731 702 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 CELA2BP08218 269 aaPredicted RBP12.62□□□□□ -0.39
TVP23B-204ENST00000571018 C1QTNF9P0C862 333 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 GOLGA6DP0CG33 693 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 MYF5P13349 255 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 WNT3AP56704 352 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 E2F1Q01094 437 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 KLF1Q13351 362 aaPredicted RBP12.62□□□□□ -0.39
TVP23B-204ENST00000571018 DARS2Q6PI48 645 aaKnown RBP12.62□□□□□ -0.39
TVP23B-204ENST00000571018 UNQ6494/PRO21346Q6UXR6 183 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 LYSMD3Q7Z3D4 306 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 TMC3Q7Z5M5 1100 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 TMPRSS12Q86WS5 348 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 TTC13Q8NBP0 860 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 SCG3Q8WXD2 468 aaKnown RBP12.62□□□□□ -0.39
TVP23B-204ENST00000571018 EID2BQ96D98 161 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 OXNAD1Q96HP4 312 aaPredicted RBP12.62□□□□□ -0.39
TVP23B-204ENST00000571018 SRPK1Q96SB4 655 aaKnown RBP12.62□□□□□ -0.39
TVP23B-204ENST00000571018 AGAP2Q99490 1192 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 RIOK2Q9BVS4 552 aaKnown RBP12.62□□□□□ -0.39
TVP23B-204ENST00000571018 FRMD8Q9BZ67 464 aaPredicted RBP12.62□□□□□ -0.39
TVP23B-204ENST00000571018 FAM83DQ9H4H8 585 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 CYP4F12Q9HCS2 524 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 GOLGA6AQ9NYA3 693 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 PKD2L2Q9NZM6 624 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 RSPH14Q9UHP6 348 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 DOLKQ9UPQ8 538 aa12.62□□□□□ -0.39
TVP23B-204ENST00000571018 ARID1BQ8NFD5 2236 aaPredicted RBP12.62□□□□□ -0.39
TVP23B-204ENST00000571018 TDRD6O60522 2096 aaKnown RBP12.61□□□□□ -0.39
TVP23B-204ENST00000571018 EME2A4GXA9 379 aaPredicted RBP12.61□□□□□ -0.39
TVP23B-204ENST00000571018 KCNN4O15554 427 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 ZNF189O75820 626 aaPredicted RBP12.61□□□□□ -0.39
TVP23B-204ENST00000571018 FUCA1P04066 466 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 PTMAP06454 111 aaKnown RBP12.61□□□□□ -0.39
TVP23B-204ENST00000571018 GP1BAP07359 652 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 PIRTP0C851 137 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 RPIAP49247 311 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 MPP3Q13368 585 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 ANKRD20A2Q5SQ80 823 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 HENMT1Q5T8I9 393 aaKnown RBP12.61□□□□□ -0.39
TVP23B-204ENST00000571018 ANKRD20A1Q5TYW2 823 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 ANKRD20A3Q5VUR7 823 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 ITPRIPL1Q6GPH6 555 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 GKN2Q86XP6 184 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 SLC35F3Q8IY50 421 aa12.61□□□□□ -0.39
TVP23B-204ENST00000571018 CACTIN-AS1Q8N1I8 211 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms