RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 BRAFP15056 766 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 UCHL3P15374 230 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 POLR2EP19388 210 aaKnown RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 CPN2P22792 545 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CPT2P23786 658 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 IL32P24001 234 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 RRM2P31350 389 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 HNRNPH3P31942 346 aaKnown RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 CAPGP40121 348 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PAFAH1B1P43034 410 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CTSOP43234 321 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 MAGEA1P43355 309 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MTNR1BP49286 362 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 POU3F4P49335 361 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 FNTBP49356 437 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ACOT2P49753 483 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 LIG4P49917 911 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MECP2P51608 486 aaKnown RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 CLCNKAP51800 687 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PRKAA2P54646 552 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 TAS2R40P59535 323 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 RPS3AP61247 264 aaKnown RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 STX1BP61266 288 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 GNG11P61952 73 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ZNF200P98182 395 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 PMP22Q01453 160 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 GUCY1A3Q02108 690 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CYP24A1Q07973 514 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 TMEM62Q0P6H9 643 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MYO1EQ12965 1108 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ZNF177Q13360 481 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 DMC1Q14565 340 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 DRAP1Q14919 205 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 LRRC14Q15048 493 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 AGERQ15109 404 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 TRIP4Q15650 581 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 SNRNP35Q16560 246 aaKnown RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 NTRK2Q16620 822 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MOGQ16653 247 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 UGP2Q16851 508 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ARHGAP44Q17R89 818 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 EXOC3L4Q17RC7 722 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ASTE1Q2TB18 679 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 ANKRD20A4Q4UJ75 823 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 EPC2Q52LR7 807 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CCDC157Q569K6 752 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ANKRD20A8PQ5CZ79 823 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 UMODL1Q5DID0 1318 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ZRANB3Q5FWF4 1079 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 FIGNQ5HY92 759 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ZNF569Q5MCW4 686 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ANKRD20A2Q5SQ80 823 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 VWA5B1Q5TIE3 1220 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ANKRD20A1Q5TYW2 823 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 GKAP1Q5VSY0 366 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 PRAMEF20Q5VT98 475 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CACHD1Q5VU97 1274 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ANKRD20A3Q5VUR7 823 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 FAM160B1Q5W0V3 765 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 EEF1DP3Q658K8 133 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 SPOPLQ6IQ16 392 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 TIGD7Q6NT04 549 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 EFCAB12Q6NXP0 572 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 DEGS2Q6QHC5 323 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 TMEM270Q6UE05 265 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 C17orf99Q6UX52 265 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MFSD7Q6UXD7 560 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CRELD2Q6UXH1 353 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 TRIM72Q6ZMU5 477 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PRR23CQ6ZRP0 262 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 STXBP4Q6ZWJ1 553 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 H1FNTQ75WM6 255 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 PLPPR4Q7Z2D5 763 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 ZNF571Q7Z3V5 609 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 VASH2Q86V25 355 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PALB2Q86YC2 1186 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 RHPN2Q8IUC4 686 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CCDC117Q8IWD4 279 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 FAM20CQ8IXL6 584 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 TMEM192Q8IY95 271 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 ST13P4Q8IZP2 240 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 SIX6OS1Q8N1H7 587 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 KDM8Q8N371 416 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 EIF1ADQ8N9N8 165 aaKnown RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 EHBP1Q8NDI1 1231 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PIK3C3Q8NEB9 887 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MCPH1Q8NEM0 835 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 AKR7LQ8NHP1 331 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 LNX1Q8TBB1 728 aaPredicted RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 ATP8B4Q8TF62 1192 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 SLC20A1Q8WUM9 679 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PRPF31Q8WWY3 499 aaKnown RBP3.57□□□□□ -1.84
SMG6-208ENST00000570874 POMGNT1Q8WZA1 660 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 STARD8Q92502 1023 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CCDC127Q96BQ5 260 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 PGM2Q96G03 612 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CPB2Q96IY4 423 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 MSLNLQ96KJ4 702 aa3.57□□□□□ -1.84
SMG6-208ENST00000570874 CFAP57Q96MR6 1250 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms