RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 SLC17A4Q9Y2C5 497 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ZDHHC9Q9Y397 364 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 CCDC88CQ9P219 2028 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 PIKFYVEQ9Y2I7 2098 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ZGRF1Q86YA3 2104 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ANKUB1A6NFN9 424 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 RASA4BC9J798 803 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 F5H423 210 aaPredicted RBP7.15□□□□□ -1.26
SMG6-205ENST00000570659 PMM2O15305 246 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 LRRTM2O43300 516 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 RASA4O43374 803 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 HNRNPRO43390 633 aaKnown RBP7.15□□□□□ -1.26
SMG6-205ENST00000570659 SPAG6O75602 509 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 WISP2O76076 250 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 IGSF6O95976 241 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 RHOQP17081 205 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 ADRA1BP35368 520 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 ETFBP38117 255 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 USP8P40818 1118 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 FASLGP48023 281 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 MC1RQ01726 317 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 MAP7Q14244 749 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 POLD3Q15054 466 aaPredicted RBP7.15□□□□□ -1.26
SMG6-205ENST00000570659 ACOX1Q15067 660 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 ZRSR2Q15696 482 aaKnown RBP7.15□□□□□ -1.26
SMG6-205ENST00000570659 MEA1Q16626 185 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 CLPPQ16740 277 aaPredicted RBP7.15□□□□□ -1.26
SMG6-205ENST00000570659 CDO1Q16878 200 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 SLC25A52Q3SY17 297 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 PYCR3Q53H96 274 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 ZNF648Q5T619 568 aaPredicted RBP7.15□□□□□ -1.26
SMG6-205ENST00000570659 TMCO4Q5TGY1 634 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 DENND2CQ68D51 928 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 PWWP2BQ6NUJ5 590 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 TTI2Q6NXR4 508 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 WDR74Q6RFH5 385 aaPredicted RBP7.15□□□□□ -1.26
SMG6-205ENST00000570659 LRRC31Q6UY01 552 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 Q6ZVL8 140 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 DPPA4Q7L190 304 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 TRIM59Q8IWR1 403 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 CCDC112Q8NEF3 446 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 TEFMQ96QE5 360 aaKnown RBP7.15□□□□□ -1.26
SMG6-205ENST00000570659 HAPLN3Q96S86 360 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 TRIM62Q9BVG3 475 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 GSDMCQ9BYG8 508 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 TRIM8Q9BZR9 551 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 ING2Q9H160 280 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 LHX9Q9NQ69 397 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 TRNAU1APQ9NX07 287 aaKnown RBP7.15□□□□□ -1.26
SMG6-205ENST00000570659 DTLQ9NZJ0 730 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 OR12D3Q9UGF7 316 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 PCDHGC3Q9UN70 934 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 PCDHGA9Q9Y5G4 932 aaKnown RBP7.15□□□□□ -1.26
SMG6-205ENST00000570659 PCDHGA6Q9Y5G7 932 aa7.15□□□□□ -1.26
SMG6-205ENST00000570659 MN1Q10571 1320 aaPredicted RBP7.15□□□□□ -1.26
SMG6-205ENST00000570659 GOLGA6L3A6NEY3 463 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 NPIPB15A6NHN6 443 aaPredicted RBP7.14□□□□□ -1.27
SMG6-205ENST00000570659 C19orf84I3L1E1 186 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 ZNF185O15231 689 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 RAMP2O60895 175 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 NDUFA10O95299 355 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 C9P02748 559 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 NEFLP07196 543 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 CAPN1P07384 714 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 ELFN1P0C7U0 828 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 ZSCAN22P10073 491 aaPredicted RBP7.14□□□□□ -1.27
SMG6-205ENST00000570659 FOLR1P15328 257 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 ACANP16112 2415 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 TYRP1P17643 537 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 SYKP43405 635 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 HDAC4P56524 1084 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 FKBP3Q00688 224 aaKnown RBP7.14□□□□□ -1.27
SMG6-205ENST00000570659 CDK18Q07002 472 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 ELP6Q0PNE2 266 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 ILF3Q12906 894 aaKnown RBP eCLIP7.14□□□□□ -1.277e-7■■■■□ 23.2
SMG6-205ENST00000570659 GPS2Q13227 327 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 UGT8Q16880 541 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 CCDC14Q49A88 953 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 ZRANB3Q5FWF4 1079 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 FAM102AQ5T9C2 384 aaPredicted RBP7.14□□□□□ -1.27
SMG6-205ENST00000570659 CUZD1Q86UP6 607 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 PGBD5Q8N414 524 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 AMER2Q8N7J2 671 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 TTC13Q8NBP0 860 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 SHC3Q92529 594 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 RSC1A1Q92681 617 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 SCAMP4Q969E2 229 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 PNPLA2Q96AD5 504 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 NUS1Q96E22 293 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 CELF6Q96J87 481 aaKnown RBP7.14□□□□□ -1.27
SMG6-205ENST00000570659 C9orf72Q96LT7 481 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 PPM1MQ96MI6 270 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 SLC38A3Q99624 504 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 BRD8Q9H0E9 1235 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 MAGEH1Q9H213 219 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 UPF2Q9HAU5 1272 aaKnown RBP7.14□□□□□ -1.27
SMG6-205ENST00000570659 GDPD2Q9HCC8 539 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 PPP4R2Q9NY27 417 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 LNPEPQ9UIQ6 1025 aa7.14□□□□□ -1.27
SMG6-205ENST00000570659 KCNK6Q9Y257 313 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms