RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 FAM131CQ96AQ9 280 aa7.22□□□□□ -1.25
CNOT1-218ENST00000569732 PSMG3-AS1Q96PY0 264 aa7.22□□□□□ -1.25
CNOT1-218ENST00000569732 MIPEPQ99797 713 aa7.22□□□□□ -1.25
CNOT1-218ENST00000569732 USP29Q9HBJ7 922 aa7.22□□□□□ -1.25
CNOT1-218ENST00000569732 ASCL3Q9NQ33 180 aa7.22□□□□□ -1.25
CNOT1-218ENST00000569732 PCSK1NQ9UHG2 260 aa7.22□□□□□ -1.25
CNOT1-218ENST00000569732 HYOU1Q9Y4L1 999 aa7.22□□□□□ -1.25
CNOT1-218ENST00000569732 PAXBP1Q9Y5B6 917 aa7.22□□□□□ -1.25
CNOT1-218ENST00000569732 HEMK1Q9Y5R4 338 aaPredicted RBP7.22□□□□□ -1.25
CNOT1-218ENST00000569732 ALG6Q9Y672 507 aa7.22□□□□□ -1.25
CNOT1-218ENST00000569732 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.22□□□□□ -1.253e-6■■□□□ 11.6
CNOT1-218ENST00000569732 MYO18BQ8IUG5 2567 aa7.22□□□□□ -1.25
CNOT1-218ENST00000569732 NYNRINQ9P2P1 1898 aaKnown RBP7.21□□□□□ -1.25
CNOT1-218ENST00000569732 USP27XA6NNY8 438 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 TMEM110-MUSTN1A8MSY1 372 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 F5H5T6 163 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 PRAMEF26H0Y7S4 382 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 TRIM38O00635 465 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 PRPSAP2O60256 369 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 OPA1O60313 960 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 CSO75390 466 aaKnown RBP7.21□□□□□ -1.26
CNOT1-218ENST00000569732 RNF8O76064 485 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 PTMAP06454 111 aaKnown RBP7.21□□□□□ -1.26
CNOT1-218ENST00000569732 CD48P09326 243 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 DGKAP23743 735 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 IL4RP24394 825 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 RBMS1P29558 406 aaKnown RBP7.21□□□□□ -1.26
CNOT1-218ENST00000569732 L1CAMP32004 1257 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 NNMTP40261 264 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 CSKP41240 450 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 SLC1A1P43005 524 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 MARCKSL1P49006 195 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 DUSP3P51452 185 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-218ENST00000569732 KIF5AQ12840 1032 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 DPYSQ14117 519 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 TAZQ16635 292 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 LONRF2Q1L5Z9 754 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 SMTNL2Q2TAL5 461 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 ARL13BQ3SXY8 428 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 ATP13A4Q4VNC1 1196 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 ALFQ53S48 1182 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 FSCBQ5H9T9 825 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 ERMARDQ5T6L9 678 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 ACBD5Q5T8D3 534 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-218ENST00000569732 LRRC38Q5VT99 294 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 SCYL2Q6P3W7 929 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 POLNQ7Z5Q5 900 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 KIAA1328Q86T90 577 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 CDH24Q86UP0 819 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 NT5DC3Q86UY8 548 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 TRIM69Q86WT6 500 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 CIR1Q86X95 450 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-218ENST00000569732 CFAP52Q8N1V2 620 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 SLC25A45Q8N413 288 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 RNF10Q8N5U6 811 aaKnown RBP7.21□□□□□ -1.26
CNOT1-218ENST00000569732 HJURPQ8NCD3 748 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-218ENST00000569732 OR52K2Q8NGK3 314 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 DNAJB8Q8NHS0 232 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 KRT35Q92764 455 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 FAF2Q96CS3 445 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 SGSM3Q96HU1 749 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 MRGPRX3Q96LB0 322 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 NCAPGQ9BPX3 1015 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 DDX50Q9BQ39 737 aaKnown RBP7.21□□□□□ -1.26
CNOT1-218ENST00000569732 DUSP23Q9BVJ7 150 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 TSGA10Q9BZW7 698 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 KLC2Q9H0B6 622 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 SIK2Q9H0K1 926 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 ZWILCHQ9H900 591 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 PCDH18Q9HCL0 1135 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 KCND1Q9NSA2 647 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 PPARGC1AQ9UBK2 798 aaKnown RBP7.21□□□□□ -1.26
CNOT1-218ENST00000569732 OR12D3Q9UGF7 316 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 IL17BQ9UHF5 180 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 SLC12A6Q9UHW9 1150 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 VANGL2Q9ULK5 521 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 PCDHGA8Q9Y5G5 932 aa7.21□□□□□ -1.26
CNOT1-218ENST00000569732 A0A1B0GVM2 712 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 MACROD2A1Z1Q3 448 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 TCAF2A6NFQ2 919 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 NEMP2A6NFY4 417 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 WASH4PA8MWX3 477 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 PYCARD-AS1I3L0S3 204 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 PLRG1O43660 514 aaKnown RBP7.2□□□□□ -1.26
CNOT1-218ENST00000569732 SDC3O75056 442 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 PALMO75781 387 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 SLITRK5O94991 958 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 LUC7L3O95232 432 aaKnown RBP7.2□□□□□ -1.26
CNOT1-218ENST00000569732 IL1BP01584 269 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 FAM153BP0C7A2 387 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 MAP4P27816 1152 aaKnown RBP7.2□□□□□ -1.26
CNOT1-218ENST00000569732 CTNNA1P35221 906 aaKnown RBP7.2□□□□□ -1.26
CNOT1-218ENST00000569732 DRD3P35462 400 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 ETV3P41162 512 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 NOP2P46087 812 aaKnown RBP7.2□□□□□ -1.26
CNOT1-218ENST00000569732 PSMD8P48556 350 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 HCAR3P49019 387 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 PEX5P50542 639 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 PPP2CBP62714 309 aa7.2□□□□□ -1.26
CNOT1-218ENST00000569732 PPP2CAP67775 309 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms