RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 TSPAN33Q86UF1 283 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 ASB12Q8WXK4 309 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 UBXN4Q92575 508 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 KLK6Q92876 244 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 SKA1Q96BD8 255 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 BIRC7Q96CA5 298 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 HSPA12BQ96MM6 686 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 SERPINB12Q96P63 405 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 CDH19Q9H159 772 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 MIR1-1HGQ9H1L0 117 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 MTRF1LQ9UGC7 380 aaKnown RBP16.01■□□□□ 0.15
USB1-215ENST00000569252 DMTF1Q9Y222 760 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 ANKRD36A6QL64 1941 aa16■□□□□ 0.15
USB1-215ENST00000569252 PRAMEF26H0Y7S4 382 aa16■□□□□ 0.15
USB1-215ENST00000569252 RECQL5O94762 991 aaPredicted RBP16■□□□□ 0.15
USB1-215ENST00000569252 MGAT1P26572 445 aa16■□□□□ 0.15
USB1-215ENST00000569252 CD27P26842 260 aa16■□□□□ 0.15
USB1-215ENST00000569252 HMGCLP35914 325 aa16■□□□□ 0.15
USB1-215ENST00000569252 HADHAP40939 763 aa16■□□□□ 0.15
USB1-215ENST00000569252 DPP6P42658 865 aa16■□□□□ 0.15
USB1-215ENST00000569252 STC1P52823 247 aa16■□□□□ 0.15
USB1-215ENST00000569252 RALGDSQ12967 914 aa16■□□□□ 0.15
USB1-215ENST00000569252 HLTFQ14527 1009 aaKnown RBP eCLIP16■□□□□ 0.15
USB1-215ENST00000569252 LRRC14Q15048 493 aa16■□□□□ 0.15
USB1-215ENST00000569252 PTPRRQ15256 657 aa16■□□□□ 0.15
USB1-215ENST00000569252 HIF1AQ16665 826 aa16■□□□□ 0.15
USB1-215ENST00000569252 ZNF284Q2VY69 593 aa16■□□□□ 0.15
USB1-215ENST00000569252 ARMC3Q5W041 872 aa16■□□□□ 0.15
USB1-215ENST00000569252 LYSMD4Q5XG99 296 aa16■□□□□ 0.15
USB1-215ENST00000569252 DEFB124Q8NES8 71 aa16■□□□□ 0.15
USB1-215ENST00000569252 NUS1Q96E22 293 aa16■□□□□ 0.15
USB1-215ENST00000569252 SMIM14Q96QK8 99 aa16■□□□□ 0.15
USB1-215ENST00000569252 C1QTNF2Q9BXJ5 285 aa16■□□□□ 0.15
USB1-215ENST00000569252 TMEM121BQ9BXQ6 578 aaPredicted RBP16■□□□□ 0.15
USB1-215ENST00000569252 FAM129AQ9BZQ8 928 aa16■□□□□ 0.15
USB1-215ENST00000569252 TSPYL1Q9H0U9 437 aa16■□□□□ 0.15
USB1-215ENST00000569252 ZFR2Q9UPR6 939 aaKnown RBP16■□□□□ 0.15
USB1-215ENST00000569252 WASF3Q9UPY6 502 aa16■□□□□ 0.15
USB1-215ENST00000569252 ZBTB32Q9Y2Y4 487 aaPredicted RBP16■□□□□ 0.15
USB1-215ENST00000569252 COQ6Q9Y2Z9 468 aa16■□□□□ 0.15
USB1-215ENST00000569252 SPO11Q9Y5K1 396 aa16■□□□□ 0.15
USB1-215ENST00000569252 MAD1L1Q9Y6D9 718 aa16■□□□□ 0.15
USB1-215ENST00000569252 FASNP49327 2511 aaKnown RBP15.99■□□□□ 0.15
USB1-215ENST00000569252 FPGTO14772 594 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 TMEM63AO94886 807 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 PYGLP06737 847 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 HNRNPA2B1P22626 353 aaKnown RBP15.99■□□□□ 0.15
USB1-215ENST00000569252 LHCGRP22888 699 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 ETV3P41162 512 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 SPINT3P49223 89 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 PPP2CBP62714 309 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 PPP2CAP67775 309 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 IRX4P78413 519 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 CUL1Q13616 776 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 TMEM259Q4ZIN3 620 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 PMS2CLQ68D20 193 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 CENPUQ71F23 418 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 CYP2U1Q7Z449 544 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 HSD11B1LQ7Z5J1 315 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 CAND1Q86VP6 1230 aaKnown RBP15.99■□□□□ 0.15
USB1-215ENST00000569252 STYXQ8WUJ0 223 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 PTCD2Q8WV60 388 aaKnown RBP15.99■□□□□ 0.15
USB1-215ENST00000569252 ART4Q93070 314 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 AP2M1Q96CW1 435 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 SERAC1Q96JX3 654 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 LENG8Q96PV6 779 aaPredicted RBP15.99■□□□□ 0.15
USB1-215ENST00000569252 RANBP9Q96S59 729 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 NAT9Q9BTE0 207 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 FOXP3Q9BZS1 431 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 FAM83DQ9H4H8 585 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 BPIFA1Q9NP55 256 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 DMGDHQ9UI17 866 aaKnown RBP15.99■□□□□ 0.15
USB1-215ENST00000569252 APPL1Q9UKG1 709 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 PCDHGA5Q9Y5G8 931 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 ARL5AQ9Y689 179 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 ADAMTS9Q9P2N4 1935 aa15.99■□□□□ 0.15
USB1-215ENST00000569252 DSPP15924 2871 aaKnown RBP15.98■□□□□ 0.15
USB1-215ENST00000569252 A0A1W2PPC4 97 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 CDX4O14627 284 aaPredicted RBP15.98■□□□□ 0.15
USB1-215ENST00000569252 AURKAO14965 403 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 SPINT1O43278 529 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 FOXD2O60548 495 aaPredicted RBP15.98■□□□□ 0.15
USB1-215ENST00000569252 AVILO75366 819 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 PAMP19021 973 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 TMPRSS15P98073 1019 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 CDKN3Q16667 212 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 BBS9Q3SYG4 887 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 CCDC38Q502W7 563 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 Q6ZVL8 140 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 CCNJLQ8IV13 435 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 ZCCHC9Q8N567 271 aaKnown RBP15.98■□□□□ 0.15
USB1-215ENST00000569252 OR4K2Q8NGD2 314 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 FAM174AQ8TBP5 190 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 PIGKQ92643 395 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 DTD2Q96FN9 168 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 COQ10AQ96MF6 247 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 AASDHPPTQ9NRN7 309 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 SUSD2Q9UGT4 822 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 EIF2B4Q9UI10 523 aaKnown RBP15.98■□□□□ 0.15
USB1-215ENST00000569252 FNDC3AQ9Y2H6 1198 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms