RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	CCR5	P51681	352 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	DVL1P1	P54792	670 aa	Predicted RBP	3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	GTF2H2	Q13888	395 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	ZNF234	Q14588	700 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	VEPH1	Q14D04	833 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	ZNF766	Q5HY98	468 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	LCE1C	Q5T751	118 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	LCE1B	Q5T7P3	118 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	GGNBP1	Q5YKI7	109 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	GTF2H2C	Q6P1K8	395 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	CEACAM20	Q6UY09	585 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	ASB18	Q6ZVZ8	466 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	KCTD8	Q6ZWB6	473 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	GPAT4	Q86UL3	456 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	CTAGE4	Q8IX94	777 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	ZNF34	Q8IZ26	560 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	ZCCHC9	Q8N567	271 aa	Known RBP	3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	ADAD2	Q8NCV1	583 aa	Known RBP	3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	OR10V1	Q8NGI7	309 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	ZCCHC10	Q8TBK6	192 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	STAM	Q92783	540 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	GCC1	Q96CN9	775 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	ELP4	Q96EB1	424 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	ALG14	Q96F25	216 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	PLEKHA4	Q9H4M7	779 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	MMP25	Q9NPA2	562 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	RIC8A	Q9NPQ8	531 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	PPP1R14D	Q9NXH3	145 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	SLC25A10	Q9UBX3	287 aa	Predicted RBP	3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	CNOT7	Q9UIV1	285 aa	Known RBP	3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	PRSS21	Q9Y6M0	314 aa		3.22	□□□□□ -1.89
UBR1-209	ENST00000569243	PIP5K1C	O60331	668 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	HOXB5	P09067	269 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	ZNF23	P17027	643 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	ALDH4A1	P30038	563 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	BDKRB2	P30411	391 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	EIF2S3	P41091	472 aa	Known RBP	3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	KRTAP10-1	P60331	282 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	EFNB1	P98172	346 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	SLC1A5	Q15758	541 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	ZNF667	Q5HYK9	610 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	TMEM81	Q6P7N7	255 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	NOXA1	Q86UR1	476 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	CPO	Q8IVL8	374 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	SPATA6L	Q8N4H0	392 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	ZNF583	Q96ND8	569 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	NEURL2	Q9BR09	285 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	INTS2	Q9H0H0	1204 aa	Known RBP	3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	BPIFA1	Q9NP55	256 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	TTC7A	Q9ULT0	858 aa	Predicted RBP	3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	FAM96B	Q9Y3D0	163 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	LOXL2	Q9Y4K0	774 aa		3.21	□□□□□ -1.9
UBR1-209	ENST00000569243	UTY	O14607	1347 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	SYNGR3	O43761	229 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	PRKN	O60260	465 aa	Predicted RBP	3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	IGHV4-39	P01824	125 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	TF	P02787	698 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	MYOD1	P15172	320 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	POU1F1	P28069	291 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	CORO1A	P31146	461 aa	Known RBP	3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	SHMT1	P34896	483 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	DDIT3	P35638	169 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	DCT	P40126	519 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	CCT5	P48643	541 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	GRIK3	Q13003	919 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	FRG2	Q64ET8	278 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	TXNDC8	Q6A555	127 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	BRAT1	Q6PJG6	821 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	CYP26C1	Q6V0L0	522 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	SLC46A3	Q7Z3Q1	461 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	TRIM58	Q8NG06	486 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	DUSP19	Q8WTR2	217 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	RUFY2	Q8WXA3	655 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	PIGT	Q969N2	578 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	ST6GAL2	Q96JF0	529 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	FAM110A	Q9BQ89	295 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	FUZ	Q9BT04	418 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	OGFR	Q9NZT2	677 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	HSF4	Q9ULV5	492 aa		3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	LSM4	Q9Y4Z0	139 aa	Known RBP	3.2	□□□□□ -1.9
UBR1-209	ENST00000569243	IGLV5-45	A0A087WSX0	123 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	EXTL3	O43909	919 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	PEX14	O75381	377 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	UROD	P06132	367 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	GALT	P07902	379 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	PATE4	P0C8F1	98 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	G6PD	P11413	515 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	PGM1	P36871	562 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	KRTAP12-2	P59991	146 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	CAMK1	Q14012	370 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	C2orf68	Q2NKX9	166 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	EIF2S3L	Q2VIR3	472 aa	Known RBP	3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	GPATCH4	Q5T3I0	446 aa	Known RBP	3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	SFMBT2	Q5VUG0	894 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	LRRC8E	Q6NSJ5	796 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	TTI2	Q6NXR4	508 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	ZNF704	Q6ZNC4	412 aa	Predicted RBP	3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	RRM2B	Q7LG56	351 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	SLC35F3	Q8IY50	421 aa		3.19	□□□□□ -1.9
UBR1-209	ENST00000569243	LYG1	Q8N1E2	194 aa		3.19	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms