RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 DLGAP3O95886 979 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 CALB1P05937 261 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 UNGP13051 313 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 DESP17661 470 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 CHRNB2P17787 502 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 NR1D1P20393 614 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 VIPR1P32241 457 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 ETV3P41162 512 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 POLD2P49005 469 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 RENBPP51606 427 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 LRP8Q14114 963 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 MAP7Q14244 749 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 FHL5Q5TD97 284 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 DENND2CQ68D51 928 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 DOK6Q6PKX4 331 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 ZNF761Q86XN6 746 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 CCDC13Q8IYE1 715 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 SFRP1Q8N474 314 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 SCARF2Q96GP6 870 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 PSKH2Q96QS6 385 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 APMAPQ9HDC9 416 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 PRDM8Q9NQV8 689 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 VPS4AQ9UN37 437 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 PCDHB3Q9Y5E6 796 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 RPS6KL1Q9Y6S9 549 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 HTRA2O43464 458 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 CPP00450 1065 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 CYP2A6P11509 494 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 SOX5P35711 763 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 GPR1P46091 355 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 HHEXQ03014 270 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 DPTQ07507 201 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 IL10RBQ08334 325 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 HSP90AA4PQ58FG1 418 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 DNAJC24Q6P3W2 148 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 Q6ZVL8 140 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 ASB18Q6ZVZ8 466 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 HSD11B1LQ7Z5J1 315 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 PHF13Q86YI8 300 aaPredicted RBP11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 EFCAB3Q8N7B9 438 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 PDCD6IPQ8WUM4 868 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 NCSTNQ92542 709 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 NSMCE3Q96MG7 304 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 MCEEQ96PE7 176 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 CNPY3Q9BT09 278 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 STN1Q9H668 368 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 PLEKHM1Q9Y4G2 1056 aa11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 MRPS18BQ9Y676 258 aaKnown RBP11.74□□□□□ -0.53
GTF3C1-209ENST00000568569 NPIPB15A6NHN6 443 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 EIF3CLB5ME19 914 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 K7EM74 188 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 DFFAO00273 331 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 EEF2KO00418 725 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 GADD45BO75293 160 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 RFPL1O75677 317 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 MAP3K6O95382 1288 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 LHCGRP22888 699 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 UQCRFS1P47985 274 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 RPL7AP62424 266 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 LBRQ14739 615 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 CAMK4Q16566 473 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 CLEC16AQ2KHT3 1053 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 PYCR3Q53H96 274 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 TMCO4Q5TGY1 634 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 CAPRIN2Q6IMN6 1127 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 ADAMTSL4Q6UY14 1074 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 USP45Q70EL2 814 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 MON1BQ7L1V2 547 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 GALNT13Q8IUC8 556 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 ARHGAP12Q8IWW6 846 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 CBARPQ8N350 705 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 LZTR1Q8N653 840 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 GALNT11Q8NCW6 608 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 SSC4DQ8WTU2 575 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 SH3KBP1Q96B97 665 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 PCDHB18PQ96TA0 734 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 EIF3CQ99613 913 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 ULBP3Q9BZM4 244 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 GANQ9H2C0 597 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 SARS2Q9NP81 518 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 GPATCH2LQ9NWQ4 482 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 PHTF1Q9UMS5 762 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 AP4E1Q9UPM8 1137 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 POLHQ9Y253 713 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 TMEM98Q9Y2Y6 226 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 PCDHGC4Q9Y5F7 938 aa11.73□□□□□ -0.53
GTF3C1-209ENST00000568569 TRBV23OR9-2A0A075B6M9 112 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 TCRBV5S1A1TA0A578 114 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 DAPK3O43293 454 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 SOD1P00441 154 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 GNLYP22749 145 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 F8A1P23610 371 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 DLSTP36957 453 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 PMS2P54278 862 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 EPHA4P54764 986 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 POLR2FP61218 127 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 SLC10A7Q0GE19 358 aa11.72□□□□□ -0.53
GTF3C1-209ENST00000568569 NFATC2Q13469 925 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms