RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 LRRC14BA6NHZ5 514 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 UBXN8O00124 270 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 BNIP3LO60238 219 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 INMTO95050 263 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 ITGB6P18564 788 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 FMO4P31512 558 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 GEMP55040 296 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 FBXO47Q5MNV8 452 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 PKN3Q6P5Z2 889 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 C14orf80Q86SX3 495 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 SLC15A3Q8IY34 581 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 KDM1BQ8NB78 822 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 CLHC1Q8NHS4 586 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 ZFP90Q8TF47 636 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 MTFMTQ96DP5 389 aaKnown RBP10.89□□□□□ -0.67
PALB2-206ENST00000568219 ZNF347Q96SE7 839 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 CD320Q9NPF0 282 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 CDH9Q9ULB4 789 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 INVSQ9Y283 1065 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 GMPPBQ9Y5P6 360 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 A8MT66 165 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 BTN3A1O00481 513 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 ACOT8O14734 319 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 FFAR3O14843 346 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 GPR42O15529 346 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 MAFO75444 373 aaPredicted RBP10.89□□□□□ -0.67
PALB2-206ENST00000568219 SLC22A3O75751 556 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 IFI30P13284 250 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 ALDH3B2P48448 385 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 BACE1P56817 501 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 HERC3Q15034 1050 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 DPYSL2Q16555 572 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 ZFP69Q49AA0 526 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 BTBD8Q5XKL5 378 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 RAP1GAP2Q684P5 730 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 CERKQ8TCT0 537 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 UGT2B28Q9BY64 529 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 CCM2LQ9NUG4 571 aaPredicted RBP10.89□□□□□ -0.67
PALB2-206ENST00000568219 TRHDEQ9UKU6 1024 aa10.89□□□□□ -0.67
PALB2-206ENST00000568219 SPATA31C2B4DYI2 1134 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 NME4O00746 187 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 PPEF2O14830 753 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 BCAS1O75363 584 aaPredicted RBP10.88□□□□□ -0.67
PALB2-206ENST00000568219 TNFRSF21O75509 655 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 SLC35E2BP0CK96 405 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 ADRA1BP35368 520 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 PWP1Q13610 501 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 GRB7Q14451 532 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 ZNF773Q6PK81 442 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 PIM3Q86V86 326 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 HS3ST5Q8IZT8 346 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 ASB7Q9H672 318 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 TBC1D14Q9P2M4 693 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 TCAF1Q9Y4C2 921 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 A0A087X1B8 175 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 TTC24A2A3L6 582 aaPredicted RBP10.88□□□□□ -0.67
PALB2-206ENST00000568219 SH3BGRLO75368 114 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 GPIP06744 558 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 ARF4P18085 180 aaPredicted RBP10.88□□□□□ -0.67
PALB2-206ENST00000568219 MAP2K4P45985 399 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 PLA2G16P53816 162 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 TMEM132BQ14DG7 1078 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 STYXQ8WUJ0 223 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 BIRC7Q96CA5 298 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 MTERF3Q96E29 417 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 RHOBTB2Q9BYZ6 727 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 IMPAD1Q9NX62 359 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 LEF1Q9UJU2 399 aaPredicted RBP10.88□□□□□ -0.67
PALB2-206ENST00000568219 CPQQ9Y646 472 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 SLIT2O94813 1529 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 PSMD3O43242 534 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 TOMM70O94826 608 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 GLP2RO95838 553 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 NOS2P35228 1153 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 RUNX1T1Q06455 604 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 PRKG2Q13237 762 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 SLC10A6Q3KNW5 377 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 TREML2Q5T2D2 321 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 DEPDC1Q5TB30 811 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 STX19Q8N4C7 294 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 OR10A6Q8NH74 314 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 OTUD5Q96G74 571 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 TPD52L3Q96J77 140 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 KLHL5Q96PQ7 755 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 KATNAL1Q9BW62 490 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 BEX2Q9BXY8 128 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 VTA1Q9NP79 307 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 CASS4Q9NQ75 786 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 PCDHB3Q9Y5E6 796 aa10.88□□□□□ -0.67
PALB2-206ENST00000568219 AQP12BA6NM10 295 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 TRIM24O15164 1050 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 HBP1O60381 514 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 ZNF286BP0CG31 522 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 AKT1P31749 480 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 DGKQP52824 942 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 NCS1P62166 190 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 CCDC142Q17RM4 750 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 NHSL2Q5HYW2 709 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 BTLAQ7Z6A9 289 aa10.87□□□□□ -0.67
PALB2-206ENST00000568219 C11orf74Q86VG3 221 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms