RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 INO80DQ53TQ3 878 aaPredicted RBP13.71□□□□□ -0.21
SMG1-213ENST00000567737 LIPIQ6XZB0 460 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 SYVN1Q86TM6 617 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 DNAAF5Q86Y56 855 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 PELI3Q8N2H9 469 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 WDTC1Q8N5D0 677 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 FDCSPQ8NFU4 85 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 ELMO2Q96JJ3 720 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 EXOC2Q96KP1 924 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 KREMEN1Q96MU8 473 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 ZNF641Q96N77 438 aaPredicted RBP13.71□□□□□ -0.21
SMG1-213ENST00000567737 FRMD8Q9BZ67 464 aaPredicted RBP13.71□□□□□ -0.21
SMG1-213ENST00000567737 RETREG1Q9H6L5 497 aa13.71□□□□□ -0.21
SMG1-213ENST00000567737 DOCK4Q8N1I0 1966 aa13.71□□□□□ -0.22
SMG1-213ENST00000567737 MAP3K6O95382 1288 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 RHOQP17081 205 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 EPHA4P54764 986 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 NFATC2Q13469 925 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 SLC25A52Q3SY17 297 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.7□□□□□ -0.22
SMG1-213ENST00000567737 SPNS3Q6ZMD2 512 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 ZSWIM9Q86XI8 627 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 PLXDC1Q8IUK5 500 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 PASD1Q8IV76 773 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 SMYD4Q8IYR2 804 aaPredicted RBP13.7□□□□□ -0.22
SMG1-213ENST00000567737 SFRP1Q8N474 314 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 PAF1Q8N7H5 531 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 LMO3Q8TAP4 145 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 NT5C3BQ969T7 300 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 RNF166Q96A37 237 aaPredicted RBP13.7□□□□□ -0.22
SMG1-213ENST00000567737 SH3KBP1Q96B97 665 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 NUDT9Q9BW91 350 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 TEX101Q9BY14 249 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 GPR87Q9BY21 358 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 BRD8Q9H0E9 1235 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 ACP6Q9NPH0 428 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 TMEM248Q9NWD8 314 aa13.7□□□□□ -0.22
SMG1-213ENST00000567737 FBN3Q75N90 2809 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 GOLGA6L3A6NEY3 463 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 ZG16O60844 167 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 IVLP07476 585 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 PTPN4P29074 926 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 PTGIRP43119 386 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 RPS18P62269 152 aaKnown RBP13.69□□□□□ -0.22
SMG1-213ENST00000567737 RPS15P62841 145 aaKnown RBP13.69□□□□□ -0.22
SMG1-213ENST00000567737 CDK3Q00526 305 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 FOXD4L6Q3SYB3 417 aaPredicted RBP13.69□□□□□ -0.22
SMG1-213ENST00000567737 PLEKHN1Q494U1 663 aaPredicted RBP13.69□□□□□ -0.22
SMG1-213ENST00000567737 FOXD4L3Q6VB84 417 aaPredicted RBP13.69□□□□□ -0.22
SMG1-213ENST00000567737 NLRP14Q86W24 1093 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 FAM131BQ86XD5 332 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 ZDHHC17Q8IUH5 632 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 C1orf131Q8NDD1 294 aaKnown RBP13.69□□□□□ -0.22
SMG1-213ENST00000567737 NUS1Q96E22 293 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 OR2M4Q96R27 311 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 EPB41L1Q9H4G0 881 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 GPR83Q9NYM4 423 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 SLC17A4Q9Y2C5 497 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 PLEKHM1Q9Y4G2 1056 aa13.69□□□□□ -0.22
SMG1-213ENST00000567737 COPG1Q9Y678 874 aaKnown RBP13.69□□□□□ -0.22
SMG1-213ENST00000567737 MN1Q10571 1320 aaPredicted RBP13.68□□□□□ -0.22
SMG1-213ENST00000567737 A0A1B0GVL5 298 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 SSU72P8A0A1W2PR75 194 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 ZNF185O15231 689 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 P4HA2O15460 535 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 SPAG6O75602 509 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 PLEKP08567 350 aaPredicted RBP13.68□□□□□ -0.22
SMG1-213ENST00000567737 PFKFB1P16118 471 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 GM2AP17900 193 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 POLD2P49005 469 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 SH3BP2P78314 561 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 PTK2Q05397 1052 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 IL10RAQ13651 578 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 TESK1Q15569 626 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 AFMIDQ63HM1 303 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 DPPA4Q7L190 304 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 PPP1R3BQ86XI6 285 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 CAMK1DQ8IU85 385 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 ST6GALNAC3Q8NDV1 305 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 C9orf72Q96LT7 481 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 TUBGCP5Q96RT8 1024 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 RUFY1Q96T51 708 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.68□□□□□ -0.22
SMG1-213ENST00000567737 SARS2Q9NP81 518 aaKnown RBP13.68□□□□□ -0.22
SMG1-213ENST00000567737 COPG2Q9UBF2 871 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 LHX3Q9UBR4 397 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 OR12D3Q9UGF7 316 aa13.68□□□□□ -0.22
SMG1-213ENST00000567737 MTORP42345 2549 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 GOLGA6CA6NDK9 693 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 GOLGA6BA6NDN3 693 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 A6NL46 340 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 A8MX80 341 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 GOLGA6DP0CG33 693 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 FGF5P12034 268 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 SERPINA4P29622 427 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 SEPHS1P49903 392 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMG1-213ENST00000567737 PTPN20Q4JDL3 420 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 CYB5D1Q6P9G0 228 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 DOK6Q6PKX4 331 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms