RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TMPRSS9Q7Z410 1059 aa14.94□□□□□ -0.02
RNF40-209ENST00000566703 TSPAN33Q86UF1 283 aa14.94□□□□□ -0.02
RNF40-209ENST00000566703 NAGSQ8N159 534 aa14.94□□□□□ -0.02
RNF40-209ENST00000566703 AP2M1Q96CW1 435 aa14.94□□□□□ -0.02
RNF40-209ENST00000566703 POLR1EQ9GZS1 481 aaKnown RBP14.94□□□□□ -0.02
RNF40-209ENST00000566703 CDH19Q9H159 772 aa14.94□□□□□ -0.02
RNF40-209ENST00000566703 ABCG8Q9H221 673 aa14.94□□□□□ -0.02
RNF40-209ENST00000566703 ANAPC7Q9UJX3 599 aa14.94□□□□□ -0.02
RNF40-209ENST00000566703 RPL26L1Q9UNX3 145 aaKnown RBP14.94□□□□□ -0.02
RNF40-209ENST00000566703 UNC13CQ8NB66 2214 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 PRAMEF33A0A0G2JMD5 474 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 A0A0J9YYE9 177 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 GOLGA6CA6NDK9 693 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 GOLGA6BA6NDN3 693 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 C9orf172C9J069 976 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 MATN3O15232 486 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 PRAMEF10O60809 474 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 TRBC1P01850 177 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 GOLGA6DP0CG33 693 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 SFTPCP11686 197 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 CTPS1P17812 591 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 PBX1P40424 430 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 GARSP41250 739 aaKnown RBP14.93□□□□□ -0.02
RNF40-209ENST00000566703 LIMK2P53671 638 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 MAPK10P53779 464 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 TPM4P67936 248 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 PTSQ03393 145 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 LRP8Q14114 963 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 C16orf72Q14CZ0 275 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 IFI16Q16666 785 aaKnown RBP14.93□□□□□ -0.02
RNF40-209ENST00000566703 AMZ1Q400G9 498 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 MANEAQ5SRI9 462 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 LRRC66Q68CR7 880 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 ALKBH5Q6P6C2 394 aaKnown RBP14.93□□□□□ -0.02
RNF40-209ENST00000566703 SLC30A9Q6PML9 568 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 ZNF574Q6ZN55 896 aaPredicted RBP14.93□□□□□ -0.02
RNF40-209ENST00000566703 ZSCAN1Q8NBB4 408 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 OR4D9Q8NGE8 314 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 OR2M4Q96R27 311 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 FUCA2Q9BTY2 467 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 NUP85Q9BW27 656 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 RDH14Q9HBH5 336 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 GOLGA6AQ9NYA3 693 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 CAPN11Q9UMQ6 739 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 PCDHGA3Q9Y5H0 932 aa14.93□□□□□ -0.02
RNF40-209ENST00000566703 ANKRD36A6QL64 1941 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 A0A087X0T9 212 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 IGHV5-10-1A0A0J9YXX1 117 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 PPM1DO15297 605 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 SOD1P00441 154 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 FAM228BP0C875 321 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 CA4P22748 312 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 ACTR1BP42025 376 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 FASLGP48023 281 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 POLD2P49005 469 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 STC1P52823 247 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 EPHB1P54762 984 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 ACTR1AP61163 376 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 GPLD1P80108 840 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 FANCCQ00597 558 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 ITKQ08881 620 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 PDK2Q15119 407 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 PTPRRQ15256 657 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 LINC00303Q3SY05 128 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 PYCR3Q53H96 274 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 ZFAND4Q86XD8 727 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 MAP7D3Q8IWC1 876 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 EXD1Q8NHP7 514 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 COX14Q96I36 57 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 BTBD6Q96KE9 485 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 TAAR9Q96RI9 348 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 LYSMD1Q96S90 227 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 NUDT22Q9BRQ3 303 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 SUDS3Q9H7L9 328 aaPredicted RBP14.92□□□□□ -0.02
RNF40-209ENST00000566703 RBM22Q9NW64 420 aaKnown RBP eCLIP14.92□□□□□ -0.02
RNF40-209ENST00000566703 WDR70Q9NW82 654 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 FOXJ2Q9P0K8 574 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 LCMT1Q9UIC8 334 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 ST14Q9Y5Y6 855 aa14.92□□□□□ -0.02
RNF40-209ENST00000566703 IGHV1OR21-1A0A087WYE8 117 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 RGSL1A5PLK6 1076 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 ZIC2O95409 532 aaPredicted RBP14.91□□□□□ -0.02
RNF40-209ENST00000566703 MX2P20592 715 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 SSR1P43307 286 aaKnown RBP14.91□□□□□ -0.02
RNF40-209ENST00000566703 UBASH3AP57075 661 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 DPYSL3Q14195 570 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 NFKBIBQ15653 356 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 NCBP2-AS2Q69YL0 99 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 CAVIN1Q6NZI2 390 aaKnown RBP14.91□□□□□ -0.02
RNF40-209ENST00000566703 TMEM71Q6P5X7 295 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 RFLNAQ6ZTI6 216 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 EXD3Q8N9H8 876 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 KCTD6Q8NC69 237 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 AGBL5Q8NDL9 886 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 CCDC112Q8NEF3 446 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 PTCD2Q8WV60 388 aaKnown RBP14.91□□□□□ -0.02
RNF40-209ENST00000566703 SCAMP4Q969E2 229 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 ZNF670Q9BS34 389 aa14.91□□□□□ -0.02
RNF40-209ENST00000566703 PDP2Q9P2J9 529 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms