RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 NFKBIL1Q9UBC1 381 aaPredicted RBP26.05■■□□□ 1.76
NME3-209ENST00000566600 DMXL1Q9Y485 3027 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 H3BM21 787 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 SLC4A1P02730 911 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 ZSCAN5DPP0CG00 497 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 DCDC1P59894 354 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 HNRNPKP61978 463 aaKnown RBP eCLIP26.04■■□□□ 1.76
NME3-209ENST00000566600 INAVAQ3KP66 663 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 DENND5AQ6IQ26 1287 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 TTC27Q6P3X3 843 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 ADAMTSL4Q6UY14 1074 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 PRUNE1Q86TP1 453 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 BTN2A2Q8WVV5 523 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 WDR92Q96MX6 357 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 TEX101Q9BY14 249 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 DLL3Q9NYJ7 618 aa26.04■■□□□ 1.76
NME3-209ENST00000566600 C2orf81A6NN90 581 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 AURKAO14965 403 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 PPFIA2O75334 1257 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 SUN1O94901 812 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 CSF2P04141 144 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 MYCLP1P12525 358 aaPredicted RBP26.03■■□□□ 1.76
NME3-209ENST00000566600 CD59P13987 128 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 NME1P15531 152 aaKnown RBP26.03■■□□□ 1.76
NME3-209ENST00000566600 EPHA8P29322 1005 aaPredicted RBP26.03■■□□□ 1.76
NME3-209ENST00000566600 BLKP51451 505 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 PDE1BQ01064 536 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 OLIG2Q13516 323 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 PUM1Q14671 1186 aaKnown RBP eCLIP26.03■■□□□ 1.76
NME3-209ENST00000566600 TAF1AQ15573 450 aaPredicted RBP26.03■■□□□ 1.76
NME3-209ENST00000566600 TPRG1LQ5T0D9 272 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 SYT10Q6XYQ8 523 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 HEATR4Q86WZ0 1026 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 TTC30BQ8N4P2 665 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 BRSK1Q8TDC3 778 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.03■■□□□ 1.76
NME3-209ENST00000566600 PKP3Q9Y446 797 aa26.03■■□□□ 1.76
NME3-209ENST00000566600 TM4SF5O14894 197 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 FANCGO15287 622 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 FLRT2O43155 660 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 CRTAMO95727 393 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 GAS8O95995 478 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 KRT14P02533 472 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 SHBQ15464 509 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 HENMT1Q5T8I9 393 aaKnown RBP26.02■■□□□ 1.76
NME3-209ENST00000566600 ENPP7Q6UWV6 458 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 DBX2Q6ZNG2 339 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 NYAP1Q6ZVC0 841 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 PELI3Q8N2H9 469 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 SAP25Q8TEE9 199 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 PLEKHG4BQ96PX9 1271 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 ZSCAN5AQ9BUG6 496 aa26.02■■□□□ 1.76
NME3-209ENST00000566600 EIF2B3Q9NR50 452 aaKnown RBP26.02■■□□□ 1.76
NME3-209ENST00000566600 TNFRSF10CO14798 259 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 APRTP07741 180 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 LPOP22079 712 aaPredicted RBP26.01■■□□□ 1.75
NME3-209ENST00000566600 CDK3Q00526 305 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 IL9RQ01113 521 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 PPARDQ03181 441 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 CDH17Q12864 832 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 EIF2B5Q13144 721 aaKnown RBP26.01■■□□□ 1.75
NME3-209ENST00000566600 PDPK2PQ6A1A2 396 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 PPP1R21Q6ZMI0 780 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 GPR26Q8NDV2 337 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 OR56A4Q8NGH8 313 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 SLC32A1Q9H598 525 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 IL17CQ9P0M4 197 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 KLQ9UEF7 1012 aa26.01■■□□□ 1.75
NME3-209ENST00000566600 ASCC3Q8N3C0 2202 aaKnown RBP26■■□□□ 1.75
NME3-209ENST00000566600 CABIN1Q9Y6J0 2220 aa26■■□□□ 1.75
NME3-209ENST00000566600 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26■■□□□ 1.75
NME3-209ENST00000566600 STX7O15400 261 aaKnown RBP26■■□□□ 1.75
NME3-209ENST00000566600 SOD1P00441 154 aa26■■□□□ 1.75
NME3-209ENST00000566600 BPIP17213 487 aa26■■□□□ 1.75
NME3-209ENST00000566600 JUNDP17535 347 aa26■■□□□ 1.75
NME3-209ENST00000566600 CSRP1P21291 193 aaKnown RBP26■■□□□ 1.75
NME3-209ENST00000566600 GRK6P43250 576 aa26■■□□□ 1.75
NME3-209ENST00000566600 BASP1P80723 227 aaKnown RBP26■■□□□ 1.75
NME3-209ENST00000566600 NAXDQ8IW45 347 aa26■■□□□ 1.75
NME3-209ENST00000566600 TRAM1L1Q8N609 369 aa26■■□□□ 1.75
NME3-209ENST00000566600 DNAAF3Q8N9W5 541 aa26■■□□□ 1.75
NME3-209ENST00000566600 DTX3LQ8TDB6 740 aa26■■□□□ 1.75
NME3-209ENST00000566600 HIC2Q96JB3 615 aa26■■□□□ 1.75
NME3-209ENST00000566600 TBATAQ96M53 351 aa26■■□□□ 1.75
NME3-209ENST00000566600 RUNDC3BQ96NL0 473 aa26■■□□□ 1.75
NME3-209ENST00000566600 C19orf43Q9BQ61 176 aa26■■□□□ 1.75
NME3-209ENST00000566600 SPATA16Q9BXB7 569 aa26■■□□□ 1.75
NME3-209ENST00000566600 SLC13A1Q9BZW2 595 aa26■■□□□ 1.75
NME3-209ENST00000566600 CCDC188H7C350 402 aa25.99■■□□□ 1.75
NME3-209ENST00000566600 AP3B1O00203 1094 aa25.99■■□□□ 1.75
NME3-209ENST00000566600 RASGRP1O95267 797 aa25.99■■□□□ 1.75
NME3-209ENST00000566600 ECEL1O95672 775 aa25.99■■□□□ 1.75
NME3-209ENST00000566600 TUBB4AP04350 444 aa25.99■■□□□ 1.75
NME3-209ENST00000566600 ID4P47928 161 aa25.99■■□□□ 1.75
NME3-209ENST00000566600 SRP54P61011 504 aaKnown RBP25.99■■□□□ 1.75
NME3-209ENST00000566600 CDK16Q00536 496 aa25.99■■□□□ 1.75
NME3-209ENST00000566600 BNIP3Q12983 259 aa25.99■■□□□ 1.75
NME3-209ENST00000566600 MSLNQ13421 630 aaPredicted RBP25.99■■□□□ 1.75
NME3-209ENST00000566600 ZNF542PQ5EBM4 170 aa25.99■■□□□ 1.75
NME3-209ENST00000566600 ALS2CLQ60I27 953 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms