RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 PFN3P60673 137 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 RACK1P63244 317 aaKnown RBP8.14□□□□□ -1.11
CDH13-208ENST00000566333 SLC7A5Q01650 507 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 ACVR1Q04771 509 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 MORF4L2Q15014 288 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 LRRC14Q15048 493 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 CCDC6Q16204 474 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 MSS51Q4VC12 460 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 CCDC38Q502W7 563 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 ALS2CLQ60I27 953 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 KCTD16Q68DU8 428 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 TCEAL6Q6IPX3 200 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 CCDC70Q6NSX1 233 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 ZDHHC24Q6UX98 284 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 ASCL5Q7RTU5 278 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 MAATS1Q7Z4T9 603 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 NRSN1Q8IZ57 195 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 DNAAF3Q8N9W5 541 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 GPR26Q8NDV2 337 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 OR13H1Q8NG92 308 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 OR4K2Q8NGD2 314 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 OR13J1Q8NGT2 312 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 BRSK1Q8TDC3 778 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 PIGKQ92643 395 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 TCEAL3Q969E4 200 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 DNAJC1Q96KC8 554 aaKnown RBP8.14□□□□□ -1.11
CDH13-208ENST00000566333 BMFQ96LC9 184 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 ZNF778Q96MU6 729 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 PWWP2AQ96N64 755 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 PLEKHG4BQ96PX9 1271 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 RANBP9Q96S59 729 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 SRPK1Q96SB4 655 aaKnown RBP8.14□□□□□ -1.11
CDH13-208ENST00000566333 AGAP2Q99490 1192 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 TRIM56Q9BRZ2 755 aaKnown RBP8.14□□□□□ -1.11
CDH13-208ENST00000566333 GPR63Q9BZJ6 419 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 MIR1-1HGQ9H1L0 117 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 ABCG8Q9H221 673 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 DPH5Q9H2P9 285 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 SMOC1Q9H4F8 434 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 CAAP1Q9H8G2 361 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 CAPN10Q9HC96 672 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 XAB2Q9HCS7 855 aaKnown RBP8.14□□□□□ -1.11
CDH13-208ENST00000566333 PARD6AQ9NPB6 346 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 WHRNQ9P202 907 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 DMGDHQ9UI17 866 aaKnown RBP8.14□□□□□ -1.11
CDH13-208ENST00000566333 RAB23Q9ULC3 237 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 PNMA8BQ9ULN7 279 aaPredicted RBP8.14□□□□□ -1.11
CDH13-208ENST00000566333 SNX24Q9Y343 169 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 TCAF1Q9Y4C2 921 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 PCDHGA5Q9Y5G8 931 aa8.14□□□□□ -1.11
CDH13-208ENST00000566333 A0A1B0GTW7 788 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 CCDC78A2IDD5 438 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 HEATR9A2RTY3 570 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 RGSL1A5PLK6 1076 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 A6NNZ2 444 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 CCL22O00626 93 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 VILLO15195 856 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 RETP07949 1114 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 LPOP22079 712 aaPredicted RBP8.13□□□□□ -1.11
CDH13-208ENST00000566333 TGM1P22735 817 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 ARNTP27540 789 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 TEAD1P28347 426 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 ECHS1P30084 290 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 TRIM23P36406 574 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 ARSDP51689 593 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 AFF3P51826 1226 aaKnown RBP8.13□□□□□ -1.11
CDH13-208ENST00000566333 SESN2P58004 480 aaPredicted RBP8.13□□□□□ -1.11
CDH13-208ENST00000566333 XIAPP98170 497 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 SGCGQ13326 291 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 PEX6Q13608 980 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 SEPT6Q14141 434 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 FNBP1LQ5T0N5 605 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 PNCKQ6P2M8 343 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 PTAR1Q7Z6K3 402 aaPredicted RBP8.13□□□□□ -1.11
CDH13-208ENST00000566333 IQCHQ86VS3 1027 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 HEATR4Q86WZ0 1026 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 SPATS2Q86XZ4 545 aaKnown RBP8.13□□□□□ -1.11
CDH13-208ENST00000566333 RGL4Q8IZJ4 473 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 AP2M1Q96CW1 435 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 SIGLEC10Q96LC7 697 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 C19orf43Q9BQ61 176 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 HINFPQ9BQA5 517 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 RIOK2Q9BVS4 552 aaKnown RBP8.13□□□□□ -1.11
CDH13-208ENST00000566333 C1QTNF7Q9BXJ2 289 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 IL22Q9GZX6 179 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 RAB17Q9H0T7 212 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 ARRDC1-AS1Q9H2J1 176 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 PLAC1Q9HBJ0 212 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 BPIFA1Q9NP55 256 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 IL26Q9NPH9 171 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 FSCN3Q9NQT6 498 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 AASDHPPTQ9NRN7 309 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 TREX1Q9NSU2 369 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 ZDHHC18Q9NUE0 388 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 NLE1Q9NVX2 485 aaPredicted RBP8.13□□□□□ -1.11
CDH13-208ENST00000566333 PKD2L2Q9NZM6 624 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 SLC2A6Q9UGQ3 507 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 SUSD2Q9UGT4 822 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 FKBPLQ9UIM3 349 aa8.13□□□□□ -1.11
CDH13-208ENST00000566333 TMPRSS11EQ9UL52 423 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms