RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PCP11498 1178 aaKnown RBP4.37□□□□□ -1.71
LINC00561-201ENST00000565815 DUSP1P28562 367 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 MPGP29372 298 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 PNPLA4P41247 253 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 MVDP53602 400 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 SIGLEC14Q08ET2 396 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 MAPK7Q13164 816 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 TRPC3Q13507 836 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 IL13RA2Q14627 380 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 CNGA3Q16281 694 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 GXYLT1Q4G148 440 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 CEP78Q5JTW2 689 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 SPATA1Q5VX52 437 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 RETSATQ6NUM9 610 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 SHC4Q6S5L8 630 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 MON1AQ86VX9 555 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 ARL14EPQ8N8R7 260 aaPredicted RBP4.37□□□□□ -1.71
LINC00561-201ENST00000565815 FAM98AQ8NCA5 519 aaKnown RBP4.37□□□□□ -1.71
LINC00561-201ENST00000565815 NAXEQ8NCW5 288 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 SARAFQ96BY9 339 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 RNF125Q96EQ8 232 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 NEUROD6Q96NK8 337 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 GSDMAQ96QA5 445 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 NAP1L4Q99733 375 aaKnown RBP4.37□□□□□ -1.71
LINC00561-201ENST00000565815 CARD6Q9BX69 1037 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 CXorf56Q9H5V9 222 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.37□□□□□ -1.71
LINC00561-201ENST00000565815 NLKQ9UBE8 527 aa4.37□□□□□ -1.71
LINC00561-201ENST00000565815 MYH1P12882 1939 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 EMSYQ7Z589 1322 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 CDK5RAP2Q96SN8 1893 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 TARSL2A2RTX5 802 aaKnown RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 VWA5AO00534 786 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 DEXIO95424 95 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 CXCL10P02778 98 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 WEE2P0C1S8 567 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 IGFBP2P18065 325 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 OAS2P29728 719 aaKnown RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 PPP1R2P41236 205 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 SOX2P48431 317 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 TLE3Q04726 772 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 GABPAQ06546 454 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 MTA1Q13330 715 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 PGM5Q15124 567 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 NFIL3Q16649 462 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 RUNDC3AQ59EK9 446 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 CBWD5Q5RIA9 395 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 HIST2H2BCQ6DN03 193 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 HIST2H2BDQ6DRA6 164 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 TMEM200AQ86VY9 491 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 TC2NQ8N9U0 490 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 UCMAQ8WVF2 138 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 UROC1Q96N76 676 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 ABHD14AQ9BUJ0 271 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 FUT8Q9BYC5 575 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 LRRC2Q9BYS8 371 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 FTOQ9C0B1 505 aaKnown RBP eCLIP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 RNF41Q9H4P4 317 aaPredicted RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 AAMDCQ9H7C9 122 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 WASH6PQ9NQA3 447 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 AATFQ9NY61 560 aaKnown RBP eCLIP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 NAP1L2Q9ULW6 460 aaPredicted RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 SRPRBQ9Y5M8 271 aaKnown RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 MYH7P12883 1935 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 CYP3A7-CYP3A51PA0A087WV96 503 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 CTAGE9A4FU28 777 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 ADAM10O14672 748 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 GPAA1O43292 621 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 TGFB1I1O43294 461 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 AKAP8O43823 692 aaKnown RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 MMP1P03956 469 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 IQCF3P0C7M6 154 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 CYP3A7P24462 503 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 SHMT1P34896 483 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 ACTN2P35609 894 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 ARHGAP25P42331 645 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 HNRNPH2P55795 449 aaKnown RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 CKAP4Q07065 602 aaKnown RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 TSTQ16762 297 aaKnown RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 HSP90B2PQ58FF3 399 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 INTS11Q5TA45 600 aaKnown RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 BBS12Q6ZW61 710 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 TBC1D1Q86TI0 1168 aaPredicted RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 FAM160B2Q86V87 743 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 ACER1Q8TDN7 264 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 NOC3LQ8WTT2 800 aaKnown RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 DPF1Q92782 380 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 FYTTD1Q96QD9 318 aaKnown RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 SLF1Q9BQI6 1058 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 TMEM51Q9NW97 253 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 TMEM248Q9NWD8 314 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 RMND1Q9NWS8 449 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 MAP3K20Q9NYL2 800 aaKnown RBP4.36□□□□□ -1.71
LINC00561-201ENST00000565815 CTNNAL1Q9UBT7 734 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 MAN1B1Q9UKM7 699 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 NFE2L3Q9Y4A8 694 aa4.36□□□□□ -1.71
LINC00561-201ENST00000565815 SIP14410 1827 aa4.35□□□□□ -1.71
LINC00561-201ENST00000565815 COL4A4P53420 1690 aaPredicted RBP4.35□□□□□ -1.71
LINC00561-201ENST00000565815 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms