RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PBX1P40424 430 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 LIMK2P53671 638 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 MAPK10P53779 464 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 ILF3Q12906 894 aaKnown RBP eCLIP8.55□□□□□ -1.04
CAPN3-213ENST00000565173 IQCB1Q15051 598 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 CLPPQ16740 277 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-213ENST00000565173 FILIP1LQ4L180 1135 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 FIGNQ5HY92 759 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 PHF19Q5T6S3 580 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 NKAIN2Q5VXU1 208 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 LRRC66Q68CR7 880 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 ALG1LQ6GMV1 187 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 RAET1GQ6H3X3 334 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 SLC30A9Q6PML9 568 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 XKR5Q6UX68 686 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 ADAMTSL4Q6UY14 1074 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 VASH2Q86V25 355 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 LRRC49Q8IUZ0 686 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 ATPAF2Q8N5M1 289 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 PAF1Q8N7H5 531 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 RCBTB1Q8NDN9 531 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 HTR3CQ8WXA8 447 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 EXTL1Q92935 676 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 SCAMP4Q969E2 229 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 PMEPA1Q969W9 287 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 TRIM11Q96F44 468 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 COX14Q96I36 57 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 AGAP2Q99490 1192 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 FUCA2Q9BTY2 467 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 THAP2Q9H0W7 228 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 ABCG8Q9H221 673 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 SUDS3Q9H7L9 328 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-213ENST00000565173 NT5MQ9NPB1 228 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 STARD5Q9NSY2 213 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 CD84Q9UIB8 345 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 TMEM98Q9Y2Y6 226 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 PCDHGA4Q9Y5G9 962 aa8.55□□□□□ -1.04
CAPN3-213ENST00000565173 PCYT1BQ9Y5K3 369 aaPredicted RBP8.55□□□□□ -1.04
CAPN3-213ENST00000565173 TLN1Q9Y490 2541 aaKnown RBP8.54□□□□□ -1.04
CAPN3-213ENST00000565173 IGHV1OR21-1A0A087WYE8 117 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 A0A087X0T9 212 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 A0A0J9YYE9 177 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 SMTNL1A8MU46 457 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 HGSO14964 777 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-213ENST00000565173 EML2O95834 649 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 TRBC1P01850 177 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 FAM228BP0C875 321 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 NFKBIAP25963 317 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 CD82P27701 267 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 CSF2RBP32927 897 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 GARSP41250 739 aaKnown RBP8.54□□□□□ -1.04
CAPN3-213ENST00000565173 GPR1P46091 355 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 ZNF165P49910 485 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 STC1P52823 247 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 CYP4F2P78329 520 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 GALNT2Q10471 571 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 PAFAH1B3Q15102 231 aaKnown RBP8.54□□□□□ -1.04
CAPN3-213ENST00000565173 TBR1Q16650 682 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 MAP9Q49MG5 647 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 ATP13A4Q4VNC1 1196 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 PYCR3Q53H96 274 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 MANEAQ5SRI9 462 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 USP45Q70EL2 814 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 ZNF765Q7L2R6 523 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 TRIM74Q86UV6 250 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 CPNE8Q86YQ8 564 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 BBS5Q8N3I7 341 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 OR4D9Q8NGE8 314 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 ARRDC2Q8TBH0 407 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 MAML1Q92585 1016 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 SYN2Q92777 582 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-213ENST00000565173 FATE1Q969F0 183 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 AP2M1Q96CW1 435 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 CCDC74BQ96LY2 380 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 TAAR9Q96RI9 348 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 WDR24Q96S15 920 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 SEMA3CQ99985 751 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 NUP85Q9BW27 656 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 WDR70Q9NW82 654 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 TMEM9Q9P0T7 183 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 SEPT10Q9P0V9 454 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 PDP2Q9P2J9 529 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 RCOR3Q9P2K3 495 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-213ENST00000565173 IP6K2Q9UHH9 426 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 ANAPC7Q9UJX3 599 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 CNOT6Q9ULM6 557 aaKnown RBP8.54□□□□□ -1.04
CAPN3-213ENST00000565173 PCDHGA3Q9Y5H0 932 aa8.54□□□□□ -1.04
CAPN3-213ENST00000565173 BZW2Q9Y6E2 419 aaKnown RBP8.54□□□□□ -1.04
CAPN3-213ENST00000565173 FLNCQ14315 2725 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 A0A1W2PQJ5 194 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 GOLGA6CA6NDK9 693 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 GOLGA6BA6NDN3 693 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 MATN3O15232 486 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 SLC28A2O43868 658 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 MFSD11O43934 449 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 FAM87AP0C7U9 286 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 GOLGA6DP0CG33 693 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 THRAP10827 490 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 ZNF30P17039 623 aa8.53□□□□□ -1.04
CAPN3-213ENST00000565173 CCNCP24863 283 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms