RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 RACK1P63244 317 aaKnown RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 MRPS22P82650 360 aaKnown RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 IFITM3Q01628 133 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ROR1Q01973 937 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 PPARDQ03181 441 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 FSTL1Q12841 308 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 PTP4A2Q12974 167 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 NME3Q13232 169 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 GPR50Q13585 617 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ALCAMQ13740 583 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 MFSD10Q14728 455 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 PLCL1Q15111 1095 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 TAF1CQ15572 869 aaPredicted RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 AANATQ16613 207 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 CA9Q16790 459 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 MICAQ29983 383 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 SLFN12LQ6IEE8 588 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ERICH5Q6P6B1 374 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 C11orf88Q6PI97 169 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 RFX8Q6ZV50 586 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 C16orf62Q7Z3J2 963 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 TMPRSS9Q7Z410 1059 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 IRF2BP2Q7Z5L9 587 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 HID1Q8IV36 788 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 PPIL6Q8IXY8 311 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 DSELQ8IZU8 1212 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 CYP4Z2PQ8N1L4 340 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 DHRSXQ8N5I4 330 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 CNTD1Q8N815 330 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 DAGLBQ8NCG7 672 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 C11orf65Q8NCR3 313 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 OR1M1Q8NGA1 313 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 NDNFQ8TB73 568 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 METTL6Q8TCB7 284 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 TAS1R2Q8TE23 839 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 HEXDCQ8WVB3 486 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 NELL1Q92832 810 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 POP5Q969H6 163 aaKnown RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 MUL1Q969V5 352 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ZHX1-C8orf76Q96EF9 292 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF512Q96ME7 567 aaPredicted RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF285Q96NJ3 590 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 PPP1R2P1Q96PQ5 205 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 PKP2Q99959 881 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ZPBPQ9BS86 351 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 BDH2Q9BUT1 245 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 SPATA9Q9BWV2 254 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 GPR61Q9BZJ8 451 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 GPR88Q9GZN0 384 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ABCG8Q9H221 673 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 GANQ9H2C0 597 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ACSS3Q9H6R3 686 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 COQ10BQ9H8M1 238 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 UNKLQ9H9P5 680 aaKnown RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 COPS7BQ9H9Q2 264 aaPredicted RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 MCCC2Q9HCC0 563 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 HPS4Q9NQG7 708 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 PRDM9Q9NQV7 894 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 WWOXQ9NZC7 414 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 TMEM216Q9P0N5 145 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ARMCX1Q9P291 453 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 MORF4L1Q9UBU8 362 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ADAM30Q9UKF2 790 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 CDH9Q9ULB4 789 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 USP22Q9UPT9 525 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ERVK-19Q9WJR5 959 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 RUVBL2Q9Y230 463 aaKnown RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 MAN2B2Q9Y2E5 1009 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 NAALAD2Q9Y3Q0 740 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 RNF215Q9Y6U7 377 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ECM29Q5VYK3 1845 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CCDC78A2IDD5 438 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 C7orf72A4D263 438 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 PMS2P1A4D2B8 440 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 RGSL1A5PLK6 1076 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 OR6C74A6NCV1 312 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 FOXO6A8MYZ6 492 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 WDR64B1ANS9 1081 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ERVV-1B6SEH8 477 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CDC7O00311 574 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 KHNYNO15037 678 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ADAM12O43184 909 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 RAD1O60671 282 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 H2AFYO75367 372 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 NOL4O94818 638 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ALPPP05187 535 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ADRB1P08588 477 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 FBP1P09467 338 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 ITGAMP11215 1152 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CYP2A6P11509 494 aaPredicted RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 HLA-EP13747 358 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 PRF1P14222 555 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 DARSP14868 501 aaKnown RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 CTPS1P17812 591 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 SPI1P17947 270 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 SLC9A1P19634 815 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 XPAP23025 273 aaPredicted RBP6.28□□□□□ -1.4
PTPN9-204ENST00000564970 DNAJB1P25685 340 aa6.28□□□□□ -1.4
PTPN9-204ENST00000564970 NUP62P37198 522 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms