RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 A8MV72 311 aaPredicted RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 B4DGG1 531 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 INAFM1C9JVW0 142 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 ATP2A1O14983 1001 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 ENTPD3O75355 529 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 ERAL1O75616 437 aaKnown RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 ACTN1P12814 892 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 DDX5P17844 614 aaKnown RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 PON1P27169 355 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 RAD23BP54727 409 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 MRPS34P82930 218 aaKnown RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 ROR2Q01974 943 aaKnown RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 ZC3HC1Q86WB0 502 aaKnown RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 HACE1Q8IYU2 909 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 DSELQ8IZU8 1212 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 ZNF778Q96MU6 729 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 SERINC2Q96SA4 455 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 GAD1Q99259 594 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 SLF1Q9BQI6 1058 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 FAM234AQ9H0X4 552 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 KCNN2Q9H2S1 579 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 ACSS1Q9NUB1 689 aaPredicted RBP4.74□□□□□ -1.65
LINC00560-201ENST00000564593 CMAHPQ9Y471 501 aa4.74□□□□□ -1.65
LINC00560-201ENST00000564593 PASKQ96RG2 1323 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 IGHV4-28A0A0C4DH34 117 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 P4HA2O15460 535 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 DAB1O75553 588 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 HIST1H2ABP04908 130 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 TUBBP07437 444 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 SELLP14151 372 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 ANXA7P20073 488 aaKnown RBP4.73□□□□□ -1.65
LINC00560-201ENST00000564593 HIST1H2ADP20671 130 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 HOXD3P31249 432 aaPredicted RBP4.73□□□□□ -1.65
LINC00560-201ENST00000564593 STX2P32856 288 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 NRIP1P48552 1158 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 MRPS5P82675 430 aaKnown RBP4.73□□□□□ -1.65
LINC00560-201ENST00000564593 GRIK2Q13002 908 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 DLK2Q6UY11 383 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 HIST3H2AQ7L7L0 130 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 TAOK1Q7L7X3 1001 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 CACNA2D4Q7Z3S7 1137 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 TMTC2Q8N394 836 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 MOAP1Q96BY2 351 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 TXNDC15Q96J42 360 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 SH3GL2Q99962 352 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 HAUS8Q9BT25 410 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 MMTAG2Q9BU76 263 aaKnown RBP4.73□□□□□ -1.65
LINC00560-201ENST00000564593 C1QTNF1Q9BXJ1 281 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 HRH4Q9H3N8 390 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 CNGB3Q9NQW8 809 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 HIF1ANQ9NWT6 349 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 MRPL15Q9P015 296 aaKnown RBP4.73□□□□□ -1.65
LINC00560-201ENST00000564593 SLC9A2Q9UBY0 812 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 CLIC4Q9Y696 253 aa4.73□□□□□ -1.65
LINC00560-201ENST00000564593 TCERG1O14776 1098 aaKnown RBP4.72□□□□□ -1.65
LINC00560-201ENST00000564593 OGG1O15527 345 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 PLOD3O60568 738 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 UBA1P22314 1058 aaKnown RBP4.72□□□□□ -1.65
LINC00560-201ENST00000564593 HOXC9P31274 260 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 KCNJ4P48050 445 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 MXI1P50539 228 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 RRP1P56182 461 aaKnown RBP4.72□□□□□ -1.65
LINC00560-201ENST00000564593 ABATP80404 500 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 CALD1Q05682 793 aaKnown RBP4.72□□□□□ -1.65
LINC00560-201ENST00000564593 EFNB3Q15768 340 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 NTRK2Q16620 822 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 PNLIPRP3Q17RR3 467 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 LEXMQ3ZCV2 418 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 PPP6R3Q5H9R7 873 aaPredicted RBP4.72□□□□□ -1.65
LINC00560-201ENST00000564593 ZNF425Q6IV72 752 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 SLC36A4Q6YBV0 504 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 SCML4Q8N228 414 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 OIT3Q8WWZ8 545 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 KXD1Q9BQD3 176 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 DCLK3Q9C098 648 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 LTB4R2Q9NPC1 389 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 GIMAP4Q9NUV9 329 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 MTMR10Q9NXD2 777 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 COPG2Q9UBF2 871 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 OR14J1Q9UGF5 321 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 SEC63Q9UGP8 760 aaKnown RBP4.72□□□□□ -1.65
LINC00560-201ENST00000564593 FBXW11Q9UKB1 542 aa4.72□□□□□ -1.65
LINC00560-201ENST00000564593 PTRH2Q9Y3E5 179 aaKnown RBP4.72□□□□□ -1.65
LINC00560-201ENST00000564593 OR2A25A4D2G3 310 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 CH25HO95992 272 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 CRYABP02511 175 aaKnown RBP4.71□□□□□ -1.66
LINC00560-201ENST00000564593 NR2F1P10589 423 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 ACADLP28330 430 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 AMTP48728 403 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 BMP2KLQ5H9B9 411 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 TMEM198Q66K66 360 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 GPR139Q6DWJ6 353 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 TECPR1Q7Z6L1 1165 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 SDCCAG8Q86SQ7 713 aaPredicted RBP4.71□□□□□ -1.66
LINC00560-201ENST00000564593 TSPAN33Q86UF1 283 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 PRR26Q8N8Z3 221 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 IL17RCQ8NAC3 791 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 OR14A16Q8NHC5 309 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 ASB5Q8WWX0 329 aa4.71□□□□□ -1.66
LINC00560-201ENST00000564593 RND1Q92730 232 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms