RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 CNTN4Q8IWV2 1026 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 CHPFQ8IZ52 775 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 CYP4X1Q8N118 509 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 NDUFAF2Q8N183 169 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 PGBD3Q8N328 593 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 SLC25A41Q8N5S1 370 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.76□□□□□ -0.85
UBFD1-203ENST00000564106 BRSK1Q8TDC3 778 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 MZB1Q8WU39 189 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 SCG3Q8WXD2 468 aaKnown RBP9.76□□□□□ -0.85
UBFD1-203ENST00000564106 SPOCK2Q92563 424 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 APOPT1Q96IL0 206 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 MRGPRX1Q96LB2 322 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 TUBGCP5Q96RT8 1024 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 C19orf43Q9BQ61 176 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 NSRP1Q9H0G5 558 aaKnown RBP9.76□□□□□ -0.85
UBFD1-203ENST00000564106 CCDC134Q9H6E4 229 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 ATP13A3Q9H7F0 1226 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 NOD2Q9HC29 1040 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 TREX1Q9NSU2 369 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 THAP10Q9P2Z0 257 aaPredicted RBP9.76□□□□□ -0.85
UBFD1-203ENST00000564106 LHX3Q9UBR4 397 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 PILRBQ9UKJ0 227 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 STON1Q9Y6Q2 735 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 PCNX2A6NKB5 2137 aa9.76□□□□□ -0.85
UBFD1-203ENST00000564106 TMEM131Q92545 1883 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 KNL1Q8NG31 2342 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 MROH6A6NGR9 719 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 C2orf81A6NN90 581 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 CXorf49A8MYA2 514 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-203ENST00000564106 PFDN6O15212 129 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 SLC7A4O43246 635 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 SNAP91O60641 907 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 GSRP00390 522 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 TPH1P17752 444 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 ENGP17813 658 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 SDHBP21912 280 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 NFKBIAP25963 317 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 NMBRP28336 390 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 SERPINA4P29622 427 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 HLA-FP30511 346 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 CHRNA4P43681 627 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 CCT5P48643 541 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 SERPINB8P50452 374 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 VASPP50552 380 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-203ENST00000564106 LIMK2P53671 638 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 PRAMEP78395 509 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 IL9RQ01113 521 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 BNC1Q01954 994 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 GUCY1A3Q02108 690 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 BCL2L1Q07817 233 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 ZNF234Q14588 700 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 E2F5Q15329 346 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 HSF5Q4G112 596 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-203ENST00000564106 PREPLQ4J6C6 727 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-203ENST00000564106 HSP90AA5PQ58FG0 334 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 ARMC12Q5T9G4 340 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 NCEH1Q6PIU2 408 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 LINGO4Q6UY18 593 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 KDELC2Q7Z4H8 507 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 GALNT7Q86SF2 657 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 SRLQ86TD4 932 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 LCA5Q86VQ0 697 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 PLPP6Q8IY26 295 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 APCDD1Q8J025 514 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 PCDH20Q8N6Y1 951 aaKnown RBP9.75□□□□□ -0.85
UBFD1-203ENST00000564106 DEFB124Q8NES8 71 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 OR2AP1Q8NGE2 309 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 STYXQ8WUJ0 223 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 CYB5D2Q8WUJ1 264 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 MFSD3Q96ES6 412 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 EXOC2Q96KP1 924 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 LMLNQ96KR4 655 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 FCRL3Q96P31 734 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-203ENST00000564106 TRIB3Q96RU7 358 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 RBBP8Q99708 897 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 TMEM121BQ9BXQ6 578 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-203ENST00000564106 POLMQ9NP87 494 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-203ENST00000564106 SMYD2Q9NRG4 433 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.75□□□□□ -0.85
UBFD1-203ENST00000564106 SLC27A6Q9Y2P4 619 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 RAI2Q9Y5P3 530 aa9.75□□□□□ -0.85
UBFD1-203ENST00000564106 TP53BP1Q12888 1972 aaPredicted RBP9.75□□□□□ -0.85
UBFD1-203ENST00000564106 PLXNA2O75051 1894 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 ZNF106Q9H2Y7 1883 aaKnown RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 ZFYVE26Q68DK2 2539 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 ANKRD66B4E2M5 251 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 COPEO14579 308 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 KHNYNO15037 678 aaKnown RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 TYROBPO43914 113 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 SIN3BO75182 1162 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 VAPBO95292 243 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 CD160O95971 181 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 ATP5BP06576 529 aaKnown RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 ITGA2BP08514 1039 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 ERVK-10P10266 1014 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 POLR2EP19388 210 aaKnown RBP9.74□□□□□ -0.85
UBFD1-203ENST00000564106 CD70P32970 193 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 CCNFP41002 786 aa9.74□□□□□ -0.85
UBFD1-203ENST00000564106 RECQLP46063 649 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms