RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CA5AP35218 305 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 SPAM1P38567 509 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 LEPRP48357 1165 aaKnown RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 SUOXP51687 545 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 STARD6P59095 220 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 FZD5Q13467 585 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 HSF5Q4G112 596 aaPredicted RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 FASTKD1Q53R41 847 aaKnown RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 EOGTQ5NDL2 527 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 PSAPL1Q6NUJ1 521 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 LIPIQ6XZB0 460 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 HSD11B1LQ7Z5J1 315 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 OTUD6BQ8N6M0 293 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 STMN4Q9H169 189 aaPredicted RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 FAM96AQ9H5X1 160 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 FBRSQ9HAH7 460 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 IL26Q9NPH9 171 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 TXNDC16Q9P2K2 825 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 MMP17Q9ULZ9 603 aa10.14□□□□□ -0.79
SMG1-208ENST00000563448 FNDC3AQ9Y2H6 1198 aaKnown RBP10.14□□□□□ -0.79
SMG1-208ENST00000563448 GOLGA8CPA6NN73 597 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 GPR39O43194 453 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 KRT37O76014 449 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 KRT38O76015 456 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 S1PR4O95977 384 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 ITGA2BP08514 1039 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 SNRPAP09012 282 aaKnown RBP10.13□□□□□ -0.79
SMG1-208ENST00000563448 OGNP20774 298 aaKnown RBP10.13□□□□□ -0.79
SMG1-208ENST00000563448 CNTFP26441 200 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 SPRP35270 261 aaPredicted RBP10.13□□□□□ -0.79
SMG1-208ENST00000563448 SPINT3P49223 89 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 LIMK2P53671 638 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 ELP6Q0PNE2 266 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 TMEM52BQ4KMG9 183 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 ZRANB3Q5FWF4 1079 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 LGSNQ5TDP6 509 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 MROH9Q5TGP6 573 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 AGBL4Q5VU57 503 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 CNSTQ6PJW8 725 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 FAM151BQ6UXP7 276 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 Q6ZS52 159 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 KIAA0408Q6ZU52 694 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 GALNT7Q86SF2 657 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 ZC3HC1Q86WB0 502 aaKnown RBP10.13□□□□□ -0.79
SMG1-208ENST00000563448 TMPRSS6Q8IU80 811 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 SRRM1Q8IYB3 904 aaKnown RBP10.13□□□□□ -0.79
SMG1-208ENST00000563448 PIANPQ8IYJ0 282 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 KRT222Q8N1A0 295 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 ACVR1CQ8NER5 493 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 GABPB2Q8TAK5 448 aaPredicted RBP10.13□□□□□ -0.79
SMG1-208ENST00000563448 ATXN7L3BQ96GX2 97 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 SERAC1Q96JX3 654 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 WRAP53Q9BUR4 548 aaKnown RBP10.13□□□□□ -0.79
SMG1-208ENST00000563448 LMAN1LQ9HAT1 526 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 LTB4R2Q9NPC1 389 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 PKD2L2Q9NZM6 624 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 OGFRQ9NZT2 677 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 SERGEFQ9UGK8 458 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 CD84Q9UIB8 345 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 FBXL21Q9UKT6 434 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 MTO1Q9Y2Z2 717 aaKnown RBP10.13□□□□□ -0.79
SMG1-208ENST00000563448 FADS3Q9Y5Q0 445 aa10.13□□□□□ -0.79
SMG1-208ENST00000563448 GLYATL1P3A0A0U1RQE8 302 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 A0A1W2PP55 124 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 KANSL1LA0AUZ9 987 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 SRP72O76094 671 aaKnown RBP10.12□□□□□ -0.79
SMG1-208ENST00000563448 ELFN1P0C7U0 828 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 C7P10643 843 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 LIG3P49916 1009 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 PTPN5P54829 565 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 TAS2R38P59533 333 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 CACNG1Q06432 222 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 CHRNA6Q15825 494 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 TYSND1Q2T9J0 566 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 MRNIPQ6NTE8 343 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.12□□□□□ -0.79
SMG1-208ENST00000563448 SH2D5Q6ZV89 423 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 TECPR1Q7Z6L1 1165 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 HDDC3Q8N4P3 179 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 DCLK2Q8N568 766 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 ATXN2LQ8WWM7 1075 aaKnown RBP10.12□□□□□ -0.79
SMG1-208ENST00000563448 RAB7BQ96AH8 199 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 FAM131CQ96AQ9 280 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 MTBPQ96DY7 904 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 VPS39Q96JC1 886 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 PLEKHG4BQ96PX9 1271 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 KLF6Q99612 283 aaPredicted RBP10.12□□□□□ -0.79
SMG1-208ENST00000563448 RHOJQ9H4E5 214 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 CD320Q9NPF0 282 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 APPL1Q9UKG1 709 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 ACTL7BQ9Y614 415 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 SLC30A1Q9Y6M5 507 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 H0Y858 1186 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 PSMD11O00231 422 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 RFPL1O75677 317 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 PRAMEF1O95521 474 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 DNTTP04053 509 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 ETV3P41162 512 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 CD151P48509 253 aa10.12□□□□□ -0.79
SMG1-208ENST00000563448 UBXN2BQ14CS0 331 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms