RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ARMC9Q7Z3E5 817 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 NUDT13Q86X67 352 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 CEP57Q86XR8 500 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 IGDCC3Q8IVU1 814 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 ZDHHC14Q8IZN3 488 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 SIRT6Q8N6T7 355 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 C11orf44Q8N8P7 122 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 ANKS4BQ8N8V4 417 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 FAM133AQ8N9E0 248 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 Q8NA96 180 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 NUP43Q8NFH3 380 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 OR52M1Q8NGK5 317 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 TMEM171Q8WVE6 324 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 PSPC1Q8WXF1 523 aaKnown RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 CELF1Q92879 486 aaKnown RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 GTF3C6Q969F1 213 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 TEKT1Q969V4 418 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 DCPSQ96C86 337 aaKnown RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 ERO1AQ96HE7 468 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 SAMD8Q96LT4 415 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 HNRNPABQ99729 332 aaKnown RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 TACO1Q9BSH4 297 aaKnown RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 MRI1Q9BV20 369 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 TLR10Q9BXR5 811 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 OSBPL8Q9BZF1 889 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 IMPG2Q9BZV3 1241 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 CCSER1Q9C0I3 900 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 KCNH6Q9H252 994 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 PLK3Q9H4B4 646 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 ZNF304Q9HCX3 659 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 OLAHQ9NV23 265 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 DNAJC11Q9NVH1 559 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 GDE1Q9NZC3 331 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 HSPBP1Q9NZL4 362 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 IL1RAPL1Q9NZN1 696 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 HACL1Q9UJ83 578 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 GMEB2Q9UKD1 530 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 PLAGL1Q9UM63 463 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 SLC12A4Q9UP95 1085 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 TDRKHQ9Y2W6 561 aaKnown RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 NUP98P52948 1817 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 PDS5AQ29RF7 1337 aaKnown RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D3DA0A087WVF3 549 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D3IA0A087WXS9 549 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D3EA0A087X179 549 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D3KA0A087X1G2 549 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 A0A1W2PQJ5 194 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 GXYLT2A0PJZ3 443 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 DENND3A2RUS2 1198 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D3BA6NDS4 549 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 C5orf51A6NDU8 294 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D3FA6NER0 549 aaPredicted RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 MBD3L5A6NJ08 208 aaPredicted RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D3LB9A6J9 549 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 FAM86B1E9PN63 330 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 IFIT3O14879 490 aaKnown RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 ST8SIA3O43173 380 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 CYTIPO60759 359 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 SPAG6O75602 509 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 BCL10O95999 233 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 GALTP07902 379 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 FAM86B2P0C5J1 330 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D3HP0C7X1 549 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 KRT5P13647 590 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 ARSAP15289 507 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 ZNF8P17098 575 aaPredicted RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 PRKCAP17252 672 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 GNAT2P19087 354 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 HK1P19367 917 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 DRD1P21728 446 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 CD27P26842 260 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 CTNNB1P35222 781 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 STAT5BP51692 787 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 PGDP52209 483 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 DGKEP52429 567 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 ZNF134P52741 427 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TAP1Q03518 808 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 GSTA3Q16772 222 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 FAM187BQ17R55 369 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 SKIDA1Q1XH10 827 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 C15orf59Q2T9L4 293 aaPredicted RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 KCTD21Q4G0X4 260 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D3GQ6DHY5 549 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D3CQ6IPX1 549 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 DPY19L2P1Q6NXN4 242 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 CEP85Q6P2H3 762 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 GLDNQ6ZMI3 551 aaPredicted RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 C15orf39Q6ZRI6 1047 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 CENPQQ7L2Z9 268 aaPredicted RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 CABP7Q86V35 215 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D3Q8IZP1 549 aaPredicted RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 RASGEF1CQ8N431 466 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 UXS1Q8NBZ7 420 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 SLC35B2Q8TB61 432 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 PTPMT1Q8WUK0 201 aaPredicted RBP5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 RAB40AQ8WXH6 277 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 FAM168AQ92567 244 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 THRSPQ92748 146 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 KCNJ9Q92806 393 aa5.25□□□□□ -1.57
VPS35P1-201ENST00000563400 BCL2L2Q92843 193 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms