RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ZRANB3Q5FWF4 1079 aa19.06■□□□□ 0.64
SMPD3-203ENST00000563226 RETSATQ6NUM9 610 aa19.06■□□□□ 0.64
SMPD3-203ENST00000563226 PAQR3Q6TCH7 311 aa19.06■□□□□ 0.64
SMPD3-203ENST00000563226 LYSMD3Q7Z3D4 306 aa19.06■□□□□ 0.64
SMPD3-203ENST00000563226 CMTM8Q8IZV2 173 aa19.06■□□□□ 0.64
SMPD3-203ENST00000563226 PIH1D2Q8WWB5 315 aa19.06■□□□□ 0.64
SMPD3-203ENST00000563226 SLC30A3Q99726 388 aa19.06■□□□□ 0.64
SMPD3-203ENST00000563226 RPL26L1Q9UNX3 145 aaKnown RBP19.06■□□□□ 0.64
SMPD3-203ENST00000563226 ZNF510Q9Y2H8 683 aa19.06■□□□□ 0.64
SMPD3-203ENST00000563226 SCN8AQ9UQD0 1980 aa19.06■□□□□ 0.64
SMPD3-203ENST00000563226 LOC100653049A0A140TA62 436 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 KRT34O76011 436 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 ARSAP15289 507 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 TSPAN8P19075 237 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 SERPINB5P36952 375 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 COPAP53621 1224 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 AP1S1P61966 158 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 PTPRNQ16849 979 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 EML3Q32P44 896 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 PLEKHG6Q3KR16 790 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 KHDC1Q4VXA5 237 aaKnown RBP19.05■□□□□ 0.64
SMPD3-203ENST00000563226 ARMC12Q5T9G4 340 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 METTL21CQ5VZV1 264 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 FRMD7Q6ZUT3 714 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 RPL10LQ96L21 214 aaKnown RBP19.05■□□□□ 0.64
SMPD3-203ENST00000563226 FAM161BQ96MY7 647 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 THTPAQ9BU02 230 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 RNPEPL1Q9HAU8 725 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 IL17CQ9P0M4 197 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 CDYLQ9Y232 598 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.05■□□□□ 0.64
SMPD3-203ENST00000563226 NOTCH4Q99466 2003 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 SLCO1B7G3V0H7 640 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 H0Y3Z8 333 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 UBXN8O00124 270 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 UBFD1O14562 309 aaKnown RBP19.05■□□□□ 0.64
SMPD3-203ENST00000563226 MAGEC1O60732 1142 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 CTNNB1P35222 781 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 STK19P49842 368 aaPredicted RBP19.05■□□□□ 0.64
SMPD3-203ENST00000563226 XIAPP98170 497 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 ACSBG2Q5FVE4 666 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 CTSL3PQ5NE16 218 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 PPM1LQ5SGD2 360 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 MPP7Q5T2T1 576 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 CUZD1Q86UP6 607 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 SLC22A9Q8IVM8 553 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 FIBINQ8TAL6 211 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 MARK4Q96L34 752 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 TCF12Q99081 682 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 GPR21Q99679 349 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 EMILIN2Q9BXX0 1053 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 C1orf21Q9H246 121 aa19.05■□□□□ 0.64
SMPD3-203ENST00000563226 KIAA1522Q9P206 1035 aaPredicted RBP19.05■□□□□ 0.64
SMPD3-203ENST00000563226 LRRC14BA6NHZ5 514 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 NIPSNAP2O75323 286 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 MOSPD3O75425 235 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 SKAP2O75563 359 aaPredicted RBP19.04■□□□□ 0.64
SMPD3-203ENST00000563226 IMPDH1P20839 514 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 CLCN4P51793 760 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 RAP1GDS1P52306 607 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 ACCSLQ4AC99 568 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 DNAL1Q4LDG9 190 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 UNC50Q53HI1 259 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 RALGPS1Q5JS13 557 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 DGKKQ5KSL6 1271 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 TMEM240Q5SV17 173 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 ZNF678Q5SXM1 525 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 ACAD11Q709F0 780 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 MRPL43Q8N983 215 aaKnown RBP19.04■□□□□ 0.64
SMPD3-203ENST00000563226 ACDQ96AP0 544 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 LMLNQ96KR4 655 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 CATSPER2Q96P56 530 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 ATOH8Q96SQ7 321 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 GPR63Q9BZJ6 419 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 ZNF385DQ9H6B1 395 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 TAS2R13Q9NYV9 303 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 HACD3Q9P035 362 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 ARHGAP26Q9UNA1 814 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 IRAK3Q9Y616 596 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 F8W8V4 182 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 H7C0S8 307 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 SDHDO14521 159 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 TM7SF2O76062 418 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 COX4I1P13073 169 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 MTHFD2P13995 350 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 ILF2Q12905 390 aaKnown RBP19.04■□□□□ 0.64
SMPD3-203ENST00000563226 PPIGQ13427 754 aaKnown RBP eCLIP19.04■□□□□ 0.64
SMPD3-203ENST00000563226 TEAD2Q15562 447 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 NXNQ6DKJ4 435 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 ULK2Q8IYT8 1036 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 POF1BQ8WVV4 589 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 VOPP1Q96AW1 172 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 L3HYPDHQ96EM0 354 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 CCDC97Q96F63 343 aaPredicted RBP19.04■□□□□ 0.64
SMPD3-203ENST00000563226 LENG8Q96PV6 779 aaPredicted RBP19.04■□□□□ 0.64
SMPD3-203ENST00000563226 LBHD1Q9BQE6 289 aaPredicted RBP19.04■□□□□ 0.64
SMPD3-203ENST00000563226 CCDC68Q9H2F9 335 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 ABCB8Q9NUT2 735 aa19.04■□□□□ 0.64
SMPD3-203ENST00000563226 SUPT7LO94864 414 aa19.03■□□□□ 0.64
SMPD3-203ENST00000563226 SIX3O95343 332 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms