RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 GLIS1Q8NBF1 620 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 BLOC1S5Q8TDH9 187 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 BTN2A2Q8WVV5 523 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 SCAMP4Q969E2 229 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 TBATAQ96M53 351 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 ZNF106Q9H2Y7 1883 aaKnown RBP16.66■□□□□ 0.26
CLK3-207ENST00000562389 SLC32A1Q9H598 525 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 PHPT1Q9NRX4 125 aaPredicted RBP16.66■□□□□ 0.26
CLK3-207ENST00000562389 KLF15Q9UIH9 416 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 PCOLCE2Q9UKZ9 415 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 PNMA8BQ9ULN7 279 aaPredicted RBP16.66■□□□□ 0.26
CLK3-207ENST00000562389 DNAH14Q0VDD8 3507 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 MYLKQ15746 1914 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 CTAGE9A4FU28 777 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 PDE2AO00408 941 aaPredicted RBP16.65■□□□□ 0.26
CLK3-207ENST00000562389 AURKAO14965 403 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 ZNF185O15231 689 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 SDC3O75056 442 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 CBFA2T3O75081 653 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 SLC4A1P02730 911 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 CEACAM1P13688 526 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 JUNDP17535 347 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 KELP23276 732 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 GRK6P43250 576 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 KCNJ1P48048 391 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 PPARDQ03181 441 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 ZNF542PQ5EBM4 170 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 DENND5AQ6IQ26 1287 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 ENPP7Q6UWV6 458 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 C4orf22Q6V702 233 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 GLT6D1Q7Z4J2 308 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 PRUNE1Q86TP1 453 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 PHACTR4Q8IZ21 702 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 PDCD7Q8N8D1 485 aaKnown RBP16.65■□□□□ 0.26
CLK3-207ENST00000562389 DEFB124Q8NES8 71 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 BAHD1Q8TBE0 780 aaPredicted RBP16.65■□□□□ 0.26
CLK3-207ENST00000562389 AGAP2Q99490 1192 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 APOL2Q9BQE5 337 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 RIOK2Q9BVS4 552 aaKnown RBP16.65■□□□□ 0.26
CLK3-207ENST00000562389 LGR4Q9BXB1 951 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 AP1M1Q9BXS5 423 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 FAM83DQ9H4H8 585 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 ETNK1Q9HBU6 452 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 SMARCAL1Q9NZC9 954 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 KLQ9UEF7 1012 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 WDR87Q6ZQQ6 2873 aa16.65■□□□□ 0.26
CLK3-207ENST00000562389 GOLGA6L10A0A0M3HER8 536 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 TNFRSF10CO14798 259 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 FANCGO15287 622 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 USP12O75317 370 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 KCNK5O95279 499 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 BPIP17213 487 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 DGKAP23743 735 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 RPL22P35268 128 aaKnown RBP16.64■□□□□ 0.25
CLK3-207ENST00000562389 BLKP51451 505 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 NOVA1P51513 510 aaKnown RBP16.64■□□□□ 0.25
CLK3-207ENST00000562389 MSLNQ13421 630 aaPredicted RBP16.64■□□□□ 0.25
CLK3-207ENST00000562389 SEMA5AQ13591 1074 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 SPARCL1Q14515 664 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 TAF1AQ15573 450 aaPredicted RBP16.64■□□□□ 0.25
CLK3-207ENST00000562389 ALG11Q2TAA5 492 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 GSTA5Q7RTV2 222 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 DGLUCYQ7Z3D6 616 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 C17orf53Q8N3J3 647 aaPredicted RBP16.64■□□□□ 0.25
CLK3-207ENST00000562389 TAB3Q8N5C8 712 aaPredicted RBP16.64■□□□□ 0.25
CLK3-207ENST00000562389 GPR26Q8NDV2 337 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 OR56A4Q8NGH8 313 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 SETD7Q8WTS6 366 aaKnown RBP16.64■□□□□ 0.25
CLK3-207ENST00000562389 MAGOHBQ96A72 148 aaKnown RBP16.64■□□□□ 0.25
CLK3-207ENST00000562389 CAMK1GQ96NX5 476 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 PLEKHG4BQ96PX9 1271 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 SLC13A1Q9BZW2 595 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 IL17CQ9P0M4 197 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 APOBEC3BQ9UH17 382 aaKnown RBP16.64■□□□□ 0.25
CLK3-207ENST00000562389 BTBD3Q9Y2F9 522 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 SAR1BQ9Y6B6 198 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 DGKBQ9Y6T7 804 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 PCNX2A6NKB5 2137 aa16.64■□□□□ 0.25
CLK3-207ENST00000562389 TMEM202A6NGA9 273 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 PHF2O75151 1096 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 SUN1O94901 812 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 RASGRP1O95267 797 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 ZSCAN5DPP0CG00 497 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 COILP38432 576 aaPredicted RBP16.63■□□□□ 0.25
CLK3-207ENST00000562389 HK3P52790 923 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 SRP54P61011 504 aaKnown RBP16.63■□□□□ 0.25
CLK3-207ENST00000562389 ZDHHC20Q5W0Z9 365 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 PDPK2PQ6A1A2 396 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 TTC27Q6P3X3 843 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 LINC00523Q86TU6 105 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 RBFAQ8N0V3 343 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 SLC25A45Q8N413 288 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 TRAM1L1Q8N609 369 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 ZNF548Q8NEK5 533 aaPredicted RBP16.63■□□□□ 0.25
CLK3-207ENST00000562389 BRSK1Q8TDC3 778 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 RHBDD1Q8TEB9 315 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 TSACCQ96A04 125 aaPredicted RBP16.63■□□□□ 0.25
CLK3-207ENST00000562389 PDXPQ96GD0 296 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 COX14Q96I36 57 aa16.63■□□□□ 0.25
CLK3-207ENST00000562389 HIC2Q96JB3 615 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms