RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 MED15Q96RN5 788 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 KCNS3Q9BQ31 491 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 TEX12Q9BXU0 123 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 GPR63Q9BZJ6 419 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 YIPF3Q9GZM5 350 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 PCED1AQ9H1Q7 454 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 OR51V1Q9H2C8 321 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 EPC1Q9H2F5 836 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 LRMDAQ9H2I8 198 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 TMEM245Q9H330 911 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ST6GALNAC4Q9H4F1 302 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 GSX1Q9H4S2 264 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 EVA1AQ9H8M9 152 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ANKZF1Q9H8Y5 726 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 SLC38A10Q9HBR0 1119 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 TRPC7Q9HCX4 862 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 MRPL47Q9HD33 250 aaKnown RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 PALMDQ9NP74 551 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 EMC7Q9NPA0 242 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 DMAP1Q9NPF5 467 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 DCP1AQ9NPI6 582 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 TBC1D23Q9NUY8 699 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CYP39A1Q9NYL5 469 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 PSMC3IPQ9P2W1 217 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 NDOR1Q9UHB4 597 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 DCDC2Q9UHG0 476 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ZNHIT2Q9UHR6 403 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CPA4Q9UI42 421 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 MAN1B1Q9UKM7 699 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 MAD1L1Q9Y6D9 718 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ALS2Q96Q42 1657 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 FER1L4A9Z1Z3 1794 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 UBR2Q8IWV8 1755 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 ATXN2Q99700 1313 aaKnown RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 TRBV23OR9-2A0A075B6M9 112 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 A0A0G2JLW4 131 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 A0A1W2PQU0 124 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 ANKRD34BA5PLL1 514 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 SMCO2A6NFE2 343 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 SRRM3A6NNA2 597 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 ERVV-1B6SEH8 477 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 PRR23D1E9PI22 279 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 TMPRSS2O15393 492 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 FKTNO75072 461 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 MFAP3LO75121 409 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 RPP40O75818 363 aaKnown RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 CIB2O75838 187 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 CLPXO76031 633 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 NSA2O95478 260 aaKnown RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 PDGFBP01127 241 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 NTRK1P04629 796 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 CRYGCP07315 174 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 SUPT20HL2P0C7V6 817 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 PRR23D2P0DMB1 279 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 MLNP12872 115 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 GNSP15586 552 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 TGM1P22735 817 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 TM4SF1P30408 202 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 CORO1AP31146 461 aaKnown RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 HOXC8P31273 242 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 SLC8A1P32418 973 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 PBX1P40424 430 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 KRT6CP48668 564 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 AGFG1P52594 562 aaKnown RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 SUCLG1P53597 346 aaKnown RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 SEC24CP53992 1094 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 SUMO1P63165 101 aaKnown RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 CLCQ05315 142 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 TBL3Q12788 808 aaKnown RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 RRP1BQ14684 758 aaKnown RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 KARSQ15046 597 aaKnown RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 TBCEQ15813 527 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 MEP1BQ16820 701 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 CLEC16AQ2KHT3 1053 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 FAM83EQ2M2I3 478 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 NKAIN1Q4KMZ8 207 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 TMEM119Q4V9L6 283 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 GLE1Q53GS7 698 aaKnown RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 BTBD8Q5XKL5 378 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 TANGO2Q6ICL3 276 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 OGFOD2Q6N063 350 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 RINT1Q6NUQ1 792 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 GALNT18Q6P9A2 607 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 ZNF790Q6PG37 636 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 FAM83HQ6ZRV2 1179 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 LINC00696Q6ZRV3 163 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 GK5Q6ZS86 529 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 UBE2R2Q712K3 238 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-211ENST00000562199 COPS6Q7L5N1 327 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 HEATR3Q7Z4Q2 680 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 LDHDQ86WU2 507 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 ERICH1Q86X53 443 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 PHACTR4Q8IZ21 702 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 MIER2Q8N344 545 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 MINDY2Q8NBR6 621 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 TMEM145Q8NBT3 493 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 PPFIBP2Q8ND30 876 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 BHLHE23Q8NDY6 225 aa5.52□□□□□ -1.53
CAPN3-211ENST00000562199 OR6J1Q8NGC5 347 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms