RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 AURKCQ9UQB9 309 aa13.3□□□□□ -0.28
CLK3-206ENST00000562078 NOD1Q9Y239 953 aa13.3□□□□□ -0.28
CLK3-206ENST00000562078 TANC1Q9C0D5 1861 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 CHADO15335 359 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 ALDH1A2O94788 518 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 APRTP07741 180 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 KCNE1P15382 129 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 SPNP16150 400 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 ITIH1P19827 911 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 TAF6P49848 677 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 SERPINB9P50453 376 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 MRPS6P82932 125 aaKnown RBP13.29□□□□□ -0.28
CLK3-206ENST00000562078 VAC14Q08AM6 782 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 TRIM71Q2Q1W2 868 aaKnown RBP13.29□□□□□ -0.28
CLK3-206ENST00000562078 ARHGAP17Q68EM7 881 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 GK5Q6ZS86 529 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 NEK10Q6ZWH5 1172 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 APPL2Q8NEU8 664 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 OR2T3Q8NH03 318 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 LRRN4Q8WUT4 740 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 S100ZQ8WXG8 99 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 KHSRPQ92945 711 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLK3-206ENST00000562078 ZFP42Q96MM3 310 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 FRMD8P1Q9BZ68 369 aaPredicted RBP13.29□□□□□ -0.28
CLK3-206ENST00000562078 ZNF385DQ9H6B1 395 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 CPNE5Q9HCH3 593 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 SYCE1LA8MT33 242 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 DPYSL4O14531 572 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 SLC22A1O15245 554 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 ACOX3O15254 700 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 CABYRO75952 493 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 DLGAP3O95886 979 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 JUNP05412 331 aaKnown RBP13.29□□□□□ -0.28
CLK3-206ENST00000562078 BCAT1P54687 386 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 BST2Q10589 180 aaKnown RBP13.29□□□□□ -0.28
CLK3-206ENST00000562078 CDC20Q12834 499 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 POLD3Q15054 466 aaPredicted RBP13.29□□□□□ -0.28
CLK3-206ENST00000562078 NPTX1Q15818 432 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 SCML4Q8N228 414 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 PSMA8Q8TAA3 256 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 MAP6Q96JE9 813 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 TRIM39Q9HCM9 518 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 GIMAP4Q9NUV9 329 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 PKD2L2Q9NZM6 624 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 CACNG4Q9UBN1 327 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 DCDC2Q9UHG0 476 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 OAZ3Q9UMX2 235 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 TRPV2Q9Y5S1 764 aa13.29□□□□□ -0.28
CLK3-206ENST00000562078 DEAF1O75398 565 aaPredicted RBP13.28□□□□□ -0.28
CLK3-206ENST00000562078 CCNKO75909 580 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 ENDOD1O94919 500 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 LCP1P13796 627 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 GLULP15104 373 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 MAGP20916 626 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 HTR1BP28222 390 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 GRIA1P42261 906 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 SV2CQ496J9 727 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 CYBRD1Q53TN4 286 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 XKR4Q5GH76 650 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 INTS11Q5TA45 600 aaKnown RBP13.28□□□□□ -0.28
CLK3-206ENST00000562078 LHX8Q68G74 356 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 LRRC8EQ6NSJ5 796 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 FKBP9P1Q75LS8 142 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 OTOP3Q7RTS5 596 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 SERINC5Q86VE9 423 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 SLC2A14Q8TDB8 520 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.28□□□□□ -0.28
CLK3-206ENST00000562078 SNRNP25Q9BV90 132 aaKnown RBP13.28□□□□□ -0.28
CLK3-206ENST00000562078 DGCR6LQ9BY27 220 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 ABCB10Q9NRK6 738 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 ADPRHL2Q9NX46 363 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 COPG1Q9Y678 874 aaKnown RBP13.28□□□□□ -0.28
CLK3-206ENST00000562078 HEATR9A2RTY3 570 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 MOXD2PA6NHM9 499 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 MEIS3P2A8K0S8 358 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 ERVH48-1M5A8F1 160 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 EI24O14681 340 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 PTGESO14684 152 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 TRIM24O15164 1050 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 KRT8P05787 483 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 JUNBP17275 347 aaPredicted RBP13.28□□□□□ -0.28
CLK3-206ENST00000562078 HDCP19113 662 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 PNPLA4P41247 253 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 SEPHS1P49903 392 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 CLCNKBP51801 687 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 ROR1Q01973 937 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 FPGSQ05932 587 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 NOMO1Q15155 1222 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 NFE2Q16621 373 aaPredicted RBP13.28□□□□□ -0.28
CLK3-206ENST00000562078 CA9Q16790 459 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 PITRM1Q5JRX3 1037 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 CCNYL2Q5T2Q4 361 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 GLRX5Q86SX6 157 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 PACRGLQ8N7B6 248 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 DTX3Q8N9I9 347 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 ANKRD52Q8NB46 1076 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 ANGPTL6Q8NI99 470 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 ATL1Q8WXF7 558 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 WNT8BQ93098 351 aa13.28□□□□□ -0.28
CLK3-206ENST00000562078 NRBF2Q96F24 287 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms