RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 KYAT3Q6YP21 454 aaKnown RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TMEM184AQ6ZMB5 413 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ATG14Q6ZNE5 492 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 OTOAQ7RTW8 1153 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CPLX4Q7Z7G2 160 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ADIPOR2Q86V24 386 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ZSWIM9Q86XI8 627 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CILP2Q8IUL8 1156 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CEP97Q8IW35 865 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CHPFQ8IZ52 775 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CENPLQ8N0S6 344 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 OR13C4Q8NGS5 318 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 MAFAQ8NHW3 353 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 STYXQ8WUJ0 223 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 DYDC1Q8WWB3 177 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ING5Q8WYH8 240 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 SMG7Q92540 1137 aaKnown RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 BHMTQ93088 406 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ISG20Q96AZ6 181 aaKnown RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 EID2BQ96D98 161 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ECHDC3Q96DC8 303 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 OTUB2Q96DC9 234 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ASIC4Q96FT7 647 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 IFT43Q96FT9 208 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CDKN2AIPNLQ96HQ2 116 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 MRGPRX3Q96LB0 322 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TBATAQ96M53 351 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ELAC2Q9BQ52 826 aaKnown RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 FAM167BQ9BTA0 163 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 SLC13A1Q9BZW2 595 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 FAM107BQ9H098 131 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 SUDS3Q9H7L9 328 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TLE6Q9H808 572 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CAB39LQ9H9S4 337 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TRPV4Q9HBA0 871 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TIMMDC1Q9NPL8 285 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 SPHK2Q9NRA0 654 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 HAUS2Q9NVX0 235 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF358Q9NW07 568 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TMEM216Q9P0N5 145 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TBC1D14Q9P2M4 693 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 DCDC2Q9UHG0 476 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 DPP7Q9UHL4 492 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 MRPS23Q9Y3D9 190 aaKnown RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 STARD13Q9Y3M8 1113 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 WNT6Q9Y6F9 365 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 SCN8AQ9UQD0 1980 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 COL4A3Q01955 1670 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 DOCK8Q8NF50 2099 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 A0A096LPK6 155 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 FAM95CA0A1B0GW59 222 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 WDR91A4D1P6 747 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 G3V2L1 256 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 H7C0S8 307 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 EBAG9O00559 213 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 GAPDHSO14556 408 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CLGNO14967 610 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 TRIM24O15164 1050 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 HOXC11O43248 304 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 BUD23O43709 281 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SOCS5O75159 536 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 GOT2P00505 430 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CYBBP04839 570 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CYP17A1P05093 508 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 PRSS56P0CW18 603 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 FGF3P11487 239 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 PABPC1P11940 636 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 TYRP14679 529 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 BGNP21810 368 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 FCARP24071 287 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 TYK2P29597 1187 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 ARRB2P32121 409 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SLC8A1P32418 973 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CD151P48509 253 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 STK19P49842 368 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CDKN1CP49918 316 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SUOXP51687 545 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CLCN5P51795 746 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 EPHB1P54762 984 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 RPL26P61254 145 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 XIAPP98170 497 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 PDE1BQ01064 536 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 OCRLQ01968 901 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 LAMB3Q13751 1172 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 THOC5Q13769 683 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 DMC1Q14565 340 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 PCLAFQ15004 111 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SPRED3Q2MJR0 410 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 EML3Q32P44 896 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 HSF5Q4G112 596 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 TCEAL5Q5H9L2 206 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 FAM78AQ5JUQ0 283 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 RBM20Q5T481 1227 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 GKAP1Q5VSY0 366 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 MBLAC2Q68D91 279 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF470Q6ECI4 717 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF549Q6P9A3 640 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SYCE2Q6PIF2 218 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 TMC5Q6UXY8 1006 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 FAM47EQ6ZV65 393 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms