RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 LRIT1Q9P2V4 623 aa10.26□□□□□ -0.77
CLK3-205ENST00000561673 APPL1Q9UKG1 709 aa10.26□□□□□ -0.77
CLK3-205ENST00000561673 SUFUQ9UMX1 484 aa10.26□□□□□ -0.77
CLK3-205ENST00000561673 SLC17A4Q9Y2C5 497 aa10.26□□□□□ -0.77
CLK3-205ENST00000561673 PCDHGA8Q9Y5G5 932 aa10.26□□□□□ -0.77
CLK3-205ENST00000561673 HEY1Q9Y5J3 304 aa10.26□□□□□ -0.77
CLK3-205ENST00000561673 ST14Q9Y5Y6 855 aa10.26□□□□□ -0.77
CLK3-205ENST00000561673 RNF215Q9Y6U7 377 aa10.26□□□□□ -0.77
CLK3-205ENST00000561673 CACNA1GO43497 2377 aa10.26□□□□□ -0.77
CLK3-205ENST00000561673 ANKRD36A6QL64 1941 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 AKR1B15C9JRZ8 316 aaPredicted RBP10.25□□□□□ -0.77
CLK3-205ENST00000561673 D6RAR5 112 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 CLDN7O95471 211 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 FGF1P05230 155 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 PNLIPP16233 465 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 ZNF30P17039 623 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 AK4P27144 223 aaPredicted RBP10.25□□□□□ -0.77
CLK3-205ENST00000561673 CD86P42081 329 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 STC1P52823 247 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 RPL26P61254 145 aaKnown RBP10.25□□□□□ -0.77
CLK3-205ENST00000561673 IFI35P80217 286 aaPredicted RBP10.25□□□□□ -0.77
CLK3-205ENST00000561673 SKOR1P84550 965 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 ZBTB17Q13105 803 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 C14orf28Q4W4Y0 310 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 LRRC38Q5VT99 294 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 SLC9A4Q6AI14 798 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 NPNTQ6UXI9 565 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 ADAMTSL4Q6UY14 1074 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 ZNF765Q7L2R6 523 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 NLRP8Q86W28 1048 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 VSIG1Q86XK7 387 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 CCNJLQ8IV13 435 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 CNGA4Q8IV77 575 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 NRSN1Q8IZ57 195 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 CNTD1Q8N815 330 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 LPCAT1Q8NF37 534 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 WDR36Q8NI36 951 aaKnown RBP10.25□□□□□ -0.77
CLK3-205ENST00000561673 ZDHHC1Q8WTX9 485 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 SCARF2Q96GP6 870 aaPredicted RBP10.25□□□□□ -0.77
CLK3-205ENST00000561673 ZNF830Q96NB3 372 aaPredicted RBP10.25□□□□□ -0.77
CLK3-205ENST00000561673 AGAP2Q99490 1192 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 THSD1Q9NS62 852 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 TRNAU1APQ9NX07 287 aaKnown RBP10.25□□□□□ -0.77
CLK3-205ENST00000561673 TAAR2Q9P1P5 351 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 ATXN7L1Q9ULK2 861 aaPredicted RBP10.25□□□□□ -0.77
CLK3-205ENST00000561673 RPL26L1Q9UNX3 145 aaKnown RBP10.25□□□□□ -0.77
CLK3-205ENST00000561673 TMEM98Q9Y2Y6 226 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 HYOU1Q9Y4L1 999 aa10.25□□□□□ -0.77
CLK3-205ENST00000561673 COL27A1Q8IZC6 1860 aaPredicted RBP10.25□□□□□ -0.77
CLK3-205ENST00000561673 CCDC187A0A096LP49 1063 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 CAPN8A6NHC0 703 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 CDRT15L2A8MXV6 281 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 ANKRD66B4E2M5 251 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 APOL1O14791 398 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 NUDT21O43809 227 aaKnown RBP10.24□□□□□ -0.77
CLK3-205ENST00000561673 TNFSF15O95150 251 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 ECEL1O95672 775 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 IVLP07476 585 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 TNNT1P13805 278 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 COMTP21964 271 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 CA4P22748 312 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 ADCY8P40145 1251 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 SLC1A1P43005 524 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 INHBCP55103 352 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 CTBSQ01459 385 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 AP1B1Q10567 949 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 ILF3Q12906 894 aaKnown RBP eCLIP10.24□□□□□ -0.77
CLK3-205ENST00000561673 PDK1Q15118 436 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 TCEAL1Q15170 157 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 QPCTQ16769 361 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 DOK6Q6PKX4 331 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 SLC30A9Q6PML9 568 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 B4GALNT4Q76KP1 1039 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 SPRED1Q7Z699 444 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 TRIM74Q86UV6 250 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 C17orf82Q86X59 251 aaPredicted RBP10.24□□□□□ -0.77
CLK3-205ENST00000561673 ARL14Q8N4G2 192 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 KIAA1524Q8TCG1 905 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.24□□□□□ -0.77
CLK3-205ENST00000561673 LIN37Q96GY3 246 aaPredicted RBP10.24□□□□□ -0.77
CLK3-205ENST00000561673 COX14Q96I36 57 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 FCRL3Q96P31 734 aaPredicted RBP10.24□□□□□ -0.77
CLK3-205ENST00000561673 WDR24Q96S15 920 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 LYSMD1Q96S90 227 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 RIOK2Q9BVS4 552 aaKnown RBP10.24□□□□□ -0.77
CLK3-205ENST00000561673 GSDMCQ9BYG8 508 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 CEP41Q9BYV8 373 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 DNPEPQ9ULA0 475 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 INTUQ9ULD6 942 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 CNOT6Q9ULM6 557 aaKnown RBP10.24□□□□□ -0.77
CLK3-205ENST00000561673 PLEKHM1Q9Y4G2 1056 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 LRP4O75096 1905 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 RP1P56715 2156 aa10.24□□□□□ -0.77
CLK3-205ENST00000561673 C1orf232A0A0U1RR37 186 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 TMX2-CTNND1H3BSU7 103 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 PLD2O14939 933 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 INPP4BO15327 924 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 KLK10O43240 276 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 B4GAT1O43505 415 aa10.23□□□□□ -0.77
CLK3-205ENST00000561673 KRT1P04264 644 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms