RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 TIGD7Q6NT04 549 aaPredicted RBP25.23■■□□□ 1.63
NME3-202ENST00000561637 RBM44Q6ZP01 1051 aaKnown RBP25.23■■□□□ 1.63
NME3-202ENST00000561637 USP45Q70EL2 814 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 PRICKLE2Q7Z3G6 844 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 B3GNT8Q7Z7M8 397 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 TRIM74Q86UV6 250 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 CCDC13Q8IYE1 715 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 SDR16C5Q8N3Y7 309 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 CNTD1Q8N815 330 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 CCNYQ8ND76 341 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 NAT6Q93015 286 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 SCAMP4Q969E2 229 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 TEX101Q9BY14 249 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 FRMD8Q9BZ67 464 aaPredicted RBP25.23■■□□□ 1.63
NME3-202ENST00000561637 ABCG8Q9H221 673 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 GOLPH3Q9H4A6 298 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 CARS2Q9HA77 564 aaKnown RBP25.23■■□□□ 1.63
NME3-202ENST00000561637 HEY1Q9Y5J3 304 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 ST14Q9Y5Y6 855 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 A0A0J9YYE9 177 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 B4DGG1 531 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 AKR1B15C9JRZ8 316 aaPredicted RBP25.22■■□□□ 1.63
NME3-202ENST00000561637 NOBOXO60393 691 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 TRBC1P01850 177 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 RBMS1P29558 406 aaKnown RBP25.22■■□□□ 1.63
NME3-202ENST00000561637 CCL7P80098 99 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 CDK3Q00526 305 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 PTSQ03393 145 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 ARHGEF7Q14155 803 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 LLGL1Q15334 1064 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 DOK6Q6PKX4 331 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 LVRNQ6Q4G3 990 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 NRROSQ86YC3 692 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 FAM46DQ8NEK8 389 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 LPCAT1Q8NF37 534 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 GPR156Q8NFN8 814 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 TPCN2Q8NHX9 752 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 RNF25Q96BH1 459 aaPredicted RBP25.22■■□□□ 1.63
NME3-202ENST00000561637 HDAC11Q96DB2 347 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 TRIM4Q9C037 500 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 BRD8Q9H0E9 1235 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 PLEKHM1Q9Y4G2 1056 aa25.22■■□□□ 1.63
NME3-202ENST00000561637 A0A1W2PQM1 296 aa25.21■■□□□ 1.63
NME3-202ENST00000561637 TNFRSF10CO14798 259 aa25.21■■□□□ 1.63
NME3-202ENST00000561637 SLC9A4Q6AI14 798 aa25.21■■□□□ 1.63
NME3-202ENST00000561637 EXD3Q8N9H8 876 aa25.21■■□□□ 1.63
NME3-202ENST00000561637 TC2NQ8N9U0 490 aa25.21■■□□□ 1.63
NME3-202ENST00000561637 SCG3Q8WXD2 468 aaKnown RBP25.21■■□□□ 1.63
NME3-202ENST00000561637 FATE1Q969F0 183 aa25.21■■□□□ 1.63
NME3-202ENST00000561637 PHPT1Q9NRX4 125 aaPredicted RBP25.21■■□□□ 1.63
NME3-202ENST00000561637 SPATS2LQ9NUQ6 558 aaKnown RBP25.21■■□□□ 1.63
NME3-202ENST00000561637 UNC13CQ8NB66 2214 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 BSNQ9UPA5 3926 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 CDRT15L2A8MXV6 281 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 PSMD11O00231 422 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 NTN3O00634 580 aaPredicted RBP25.2■■□□□ 1.62
NME3-202ENST00000561637 MX2P20592 715 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 KELP23276 732 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 AK4P27144 223 aaPredicted RBP25.2■■□□□ 1.62
NME3-202ENST00000561637 CD86P42081 329 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 GNPDA1P46926 289 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 STC1P52823 247 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 DYNLT1P63172 113 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 PPIDQ08752 370 aaKnown RBP25.2■■□□□ 1.62
NME3-202ENST00000561637 CCDC81Q6ZN84 652 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 Q8N9G6 341 aaPredicted RBP25.2■■□□□ 1.62
NME3-202ENST00000561637 SUFUQ9UMX1 484 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 TMEM98Q9Y2Y6 226 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 RNF215Q9Y6U7 377 aa25.2■■□□□ 1.62
NME3-202ENST00000561637 AGRPO00253 132 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 CLDN7O95471 211 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 RPLP0P05388 317 aaKnown RBP25.19■■□□□ 1.62
NME3-202ENST00000561637 COMTP21964 271 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 NOP2P46087 812 aaKnown RBP25.19■■□□□ 1.62
NME3-202ENST00000561637 CSRP3P50461 194 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 EPHB1P54762 984 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 MAZP56270 477 aaKnown RBP25.19■■□□□ 1.62
NME3-202ENST00000561637 NFATC3Q12968 1075 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 CLN3Q13286 438 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 FOXR1Q6PIV2 292 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 MFSD7Q6UXD7 560 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 RFX6Q8HWS3 928 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 CNGA4Q8IV77 575 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 RHOT2Q8IXI1 618 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 FOXP3Q9BZS1 431 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 PCDH9Q9HC56 1237 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 LCMT1Q9UIC8 334 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 PCDHGA8Q9Y5G5 932 aa25.19■■□□□ 1.62
NME3-202ENST00000561637 EFSO43281 561 aa25.18■■□□□ 1.62
NME3-202ENST00000561637 ARHGAP25P42331 645 aa25.18■■□□□ 1.62
NME3-202ENST00000561637 GPR1P46091 355 aa25.18■■□□□ 1.62
NME3-202ENST00000561637 IFI35P80217 286 aaPredicted RBP25.18■■□□□ 1.62
NME3-202ENST00000561637 SRSF1Q07955 248 aaKnown RBP eCLIP25.18■■□□□ 1.62
NME3-202ENST00000561637 SPIDRQ14159 915 aa25.18■■□□□ 1.62
NME3-202ENST00000561637 QPCTQ16769 361 aa25.18■■□□□ 1.62
NME3-202ENST00000561637 OGFOD3Q6PK18 319 aa25.18■■□□□ 1.62
NME3-202ENST00000561637 SARM1Q6SZW1 724 aa25.18■■□□□ 1.62
NME3-202ENST00000561637 PATE1Q8WXA2 126 aa25.18■■□□□ 1.62
NME3-202ENST00000561637 AP2M1Q96CW1 435 aa25.18■■□□□ 1.62
NME3-202ENST00000561637 OLFM3Q96PB7 478 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms