RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ST14Q9Y5Y6 855 aa16.17■□□□□ 0.18
SNX1-213ENST00000561026 A0A0J9YYE9 177 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 NVLO15381 856 aaKnown RBP16.16■□□□□ 0.18
SNX1-213ENST00000561026 B4GAT1O43505 415 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 MAP3K6O95382 1288 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 SOD1P00441 154 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 TRBC1P01850 177 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 JMJD7P0C870 316 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 ZNF30P17039 623 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 CCNCP24863 283 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 AK4P27144 223 aaPredicted RBP16.16■□□□□ 0.18
SNX1-213ENST00000561026 GJC1P36383 396 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 ADCY8P40145 1251 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 GPR1P46091 355 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 CTBSQ01459 385 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 DSC2Q02487 901 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 ADAMTSL4Q6UY14 1074 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 CCDC81Q6ZN84 652 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 TMPRSS9Q7Z410 1059 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 ZNF438Q7Z4V0 828 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 NLRP8Q86W28 1048 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 JAMLQ86YT9 394 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 SLITRK4Q8IW52 837 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 SCAMP4Q969E2 229 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 FAF2Q96CS3 445 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 AP2M1Q96CW1 435 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 SCARF2Q96GP6 870 aaPredicted RBP16.16■□□□□ 0.18
SNX1-213ENST00000561026 CMKLR1Q99788 373 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 ABCG8Q9H221 673 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 PISDQ9UG56 409 aa16.16■□□□□ 0.18
SNX1-213ENST00000561026 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.16■□□□□ 0.185e-7■■□□□ 13.4
SNX1-213ENST00000561026 ZNF462Q96JM2 2506 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 RHPN2P1A8MT19 583 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 ECEL1O95672 775 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 CPNE6O95741 557 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 PRLP01236 227 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 KRT7P08729 469 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 EPHB1P54762 984 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 OR1D5P58170 312 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 TAS2R40P59535 323 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 CFHR1Q03591 330 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 PEX6Q13608 980 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 NR1D2Q14995 579 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 ZSCAN23Q3MJ62 389 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 SLC30A9Q6PML9 568 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 PIM3Q86V86 326 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.15■□□□□ 0.18
SNX1-213ENST00000561026 PQLC3Q8N755 202 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 ARRDC2Q8TBH0 407 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 TTC9Q92623 222 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 CCNL2Q96S94 520 aaPredicted RBP16.15■□□□□ 0.18
SNX1-213ENST00000561026 TDRD1Q9BXT4 1180 aaKnown RBP16.15■□□□□ 0.18
SNX1-213ENST00000561026 SEMA6CQ9H3T2 930 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 RDH14Q9HBH5 336 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 HAUS2Q9NVX0 235 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 CHKBQ9Y259 395 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 TTLL3Q9Y4R7 772 aa16.15■□□□□ 0.18
SNX1-213ENST00000561026 CAPN8A6NHC0 703 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 ZW10O43264 779 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 EFSO43281 561 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 H2AFZP0C0S5 128 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 ITIH1P19827 911 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 MX2P20592 715 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 ALDH4A1P30038 563 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 STC1P52823 247 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 RPL26P61254 145 aaKnown RBP16.14■□□□□ 0.17
SNX1-213ENST00000561026 GBE1Q04446 702 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 NIPAL4Q0D2K0 466 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 SLC10A2Q12908 348 aaPredicted RBP16.14■□□□□ 0.17
SNX1-213ENST00000561026 SLC18A3Q16572 532 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 AMZ1Q400G9 498 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 PHF19Q5T6S3 580 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 DOK6Q6PKX4 331 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 USP53Q70EK8 1073 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 H2AFVQ71UI9 128 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 ZNF765Q7L2R6 523 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 NAGSQ8N159 534 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 LRRN4Q8WUT4 740 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 CTNNBL1Q8WYA6 563 aaPredicted RBP16.14■□□□□ 0.17
SNX1-213ENST00000561026 PACSIN1Q9BY11 444 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 CDH19Q9H159 772 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 LCMT1Q9UIC8 334 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 DNPEPQ9ULA0 475 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 RPL26L1Q9UNX3 145 aaKnown RBP16.14■□□□□ 0.17
SNX1-213ENST00000561026 TMEM98Q9Y2Y6 226 aa16.14■□□□□ 0.17
SNX1-213ENST00000561026 AGRPO00253 132 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 PYGLP06737 847 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 CA4P22748 312 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 GPR3P46089 330 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 TGIF1Q15583 401 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 CLPPQ16740 277 aaPredicted RBP16.13■□□□□ 0.17
SNX1-213ENST00000561026 ASTE1Q2TB18 679 aaPredicted RBP16.13■□□□□ 0.17
SNX1-213ENST00000561026 MAP9Q49MG5 647 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 PYCR3Q53H96 274 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 RAVER1Q8IY67 606 aaKnown RBP16.13■□□□□ 0.17
SNX1-213ENST00000561026 NRSN1Q8IZ57 195 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 EXD1Q8NHP7 514 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 PATE1Q8WXA2 126 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 OR2M4Q96R27 311 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 AGAP2Q99490 1192 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms