RNA–Protein interactions for RNA: ENST00000560981.5

KNSTRN-212, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-212ENST00000560981 PEX6Q13608 980 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 SEMA3AQ14563 771 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 ELAVL3Q14576 367 aaKnown RBP16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 ZNF234Q14588 700 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 ZNF789Q5FWF6 425 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 RBM20Q5T481 1227 aaKnown RBP16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 ATG16L1Q676U5 607 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 LRRC66Q68CR7 880 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 TAS2R42Q7RTR8 314 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 SNX20Q7Z614 316 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 LDB1Q86U70 411 aaPredicted RBP16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 NUDCD3Q8IVD9 361 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 ACVR1CQ8NER5 493 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 TMIEQ8NEW7 156 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 RDH11Q8TC12 318 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 ZNF75CPQ92670 426 aaPredicted RBP16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 PPP1R16AQ96I34 528 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 PKD2L2Q9NZM6 624 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 THAP10Q9P2Z0 257 aaPredicted RBP16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 KIAA1549LQ6ZVL6 1849 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 COL4A3Q01955 1670 aa16.16■□□□□ 0.18
KNSTRN-212ENST00000560981 GLYATL1P3A0A0U1RQE8 302 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 UBA6A0AVT1 1052 aaPredicted RBP16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 ARNTLO00327 626 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 KLF11O14901 512 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 SRP72O76094 671 aaKnown RBP16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 PRAMEF1O95521 474 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 PROCP04070 461 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 BPGMP07738 259 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 PTGER3P43115 390 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 XIAPP98170 497 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 PTPRRQ15256 657 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 GPR33Q49SQ1 333 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 ERAP2Q6P179 960 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 KLC3Q6P597 504 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 LPGAT1Q92604 370 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 NDNQ99608 321 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 AARSD1Q9BTE6 412 aaKnown RBP16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 PITPNM3Q9BZ71 974 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 TMEM245Q9H330 911 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 NMRAL1Q9HBL8 299 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 GPAMQ9HCL2 828 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 B4GALT6Q9UBX8 382 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 FNDC3AQ9Y2H6 1198 aaKnown RBP16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 CRYL1Q9Y2S2 319 aa16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 PRRC2BQ5JSZ5 2229 aaKnown RBP16.15■□□□□ 0.18
KNSTRN-212ENST00000560981 KLHL2O95198 593 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 CTSLP07711 333 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 BPIP17213 487 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 FDXRP22570 491 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 SUOXP51687 545 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 ADARP55265 1226 aaKnown RBP16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 IRF9Q00978 393 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 FAM83EQ2M2I3 478 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 AGAP9Q5VTM2 703 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 PSAPL1Q6NUJ1 521 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 C16orf46Q6P387 395 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 CEP97Q8IW35 865 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 PPP1R14CQ8TAE6 165 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 EID2BQ96D98 161 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 PLEKHG4BQ96PX9 1271 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 FGFR1OP2Q9NVK5 253 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 TMEM216Q9P0N5 145 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 SIRPGQ9P1W8 387 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 EMCNQ9ULC0 261 aa16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 RANBP2P49792 3224 aaKnown RBP16.14■□□□□ 0.17
KNSTRN-212ENST00000560981 C1QTNF3-AMACRE9PGA6 284 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 PYGLP06737 847 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 ITGB7P26010 798 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 TNFRSF4P43489 277 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 MESP2Q0VG99 397 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 SMAD4Q13485 552 aaKnown RBP16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 C9orf64Q5T6V5 341 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 FAM151BQ6UXP7 276 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 TSPAN33Q86UF1 283 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 ZNF366Q8N895 744 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 ULK4Q96C45 1275 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 SCYL1Q96KG9 808 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 OLFM1Q99784 485 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 RPP25Q9BUL9 199 aaKnown RBP16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 C1QTNF1Q9BXJ1 281 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 CDH19Q9H159 772 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 MTG2Q9H4K7 406 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 ASB8Q9H765 288 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 DYRK4Q9NR20 520 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 TAS2R13Q9NYV9 303 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 CRLS1Q9UJA2 301 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 PCDHB1Q9Y5F3 818 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 C16orf96A6NNT2 1141 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 KPNA3O00505 521 aaPredicted RBP16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 EDF1O60869 148 aaKnown RBP16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 H2AFYO75367 372 aaKnown RBP16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 RHOBTB1O94844 696 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 TOP3BO95985 862 aaKnown RBP16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 ESR1P03372 595 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 LTA4HP09960 611 aaKnown RBP16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 HLA-EP13747 358 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 HNRNPLP14866 589 aaKnown RBP eCLIP16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 CPA3P15088 417 aa16.13■□□□□ 0.17
KNSTRN-212ENST00000560981 TIMP2P16035 220 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms