RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 MEA1Q16626 185 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.49□□□□□ -0.89
HERC1-210ENST00000560897 HGSNATQ68CP4 663 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 SHC4Q6S5L8 630 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 BNC2Q6ZN30 1099 aaPredicted RBP9.49□□□□□ -0.89
HERC1-210ENST00000560897 C11orf57Q6ZUT1 292 aaPredicted RBP9.49□□□□□ -0.89
HERC1-210ENST00000560897 TMEM102Q8N9M5 508 aaPredicted RBP9.49□□□□□ -0.89
HERC1-210ENST00000560897 LINC00301Q8NCQ3 95 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 CHTF18Q8WVB6 975 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 SGSM3Q96HU1 749 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 OR2M4Q96R27 311 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 TRIM8Q9BZR9 551 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 SUV39H2Q9H5I1 410 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 SYNCQ9H7C4 482 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 PDE7BQ9NP56 450 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 SARS2Q9NP81 518 aaKnown RBP9.49□□□□□ -0.89
HERC1-210ENST00000560897 MAPK8IP1Q9UQF2 711 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 MN1Q10571 1320 aaPredicted RBP9.49□□□□□ -0.89
HERC1-210ENST00000560897 TSPAN11A1L157 253 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 GOLGA6L3A6NEY3 463 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 BUB1BO60566 1050 aaPredicted RBP9.48□□□□□ -0.89
HERC1-210ENST00000560897 LETM1O95202 739 aaPredicted RBP9.48□□□□□ -0.89
HERC1-210ENST00000560897 F9P00740 461 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 FGF5P12034 268 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 EDN3P14138 238 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 SLC2A4P14672 509 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 HNRNPH3P31942 346 aaKnown RBP9.48□□□□□ -0.89
HERC1-210ENST00000560897 MAPKAPK2P49137 400 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 SH3BP2P78314 561 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 ZNF630Q2M218 657 aaPredicted RBP9.48□□□□□ -0.89
HERC1-210ENST00000560897 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.48□□□□□ -0.89
HERC1-210ENST00000560897 RWDD4Q6NW29 188 aaKnown RBP9.48□□□□□ -0.89
HERC1-210ENST00000560897 DOK6Q6PKX4 331 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 MED25Q71SY5 747 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 SLC9B2Q86UD5 537 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 DNAAF5Q86Y56 855 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 SFRP1Q8N474 314 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 ZADH2Q8N4Q0 377 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 AVL9Q8NBF6 648 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 NUS1Q96E22 293 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 C9orf72Q96LT7 481 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 RUFY1Q96T51 708 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 FRMD8Q9BZ67 464 aaPredicted RBP9.48□□□□□ -0.89
HERC1-210ENST00000560897 MAGEH1Q9H213 219 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 KCTD5Q9NXV2 234 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 CNOT8Q9UFF9 292 aaKnown RBP9.48□□□□□ -0.89
HERC1-210ENST00000560897 DNAI1Q9UI46 699 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 SNX7Q9UNH6 387 aa9.48□□□□□ -0.89
HERC1-210ENST00000560897 FARSAQ9Y285 508 aaKnown RBP9.48□□□□□ -0.89
HERC1-210ENST00000560897 TOX3O15405 576 aaPredicted RBP9.47□□□□□ -0.89
HERC1-210ENST00000560897 INSIG1O15503 277 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 MYL1P05976 194 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 IVLP07476 585 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 ART1P52961 327 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 GFERP55789 205 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 CDK3Q00526 305 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 LRP8Q14114 963 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 MIIPQ5JXC2 388 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 RAET1GQ6H3X3 334 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 LIPIQ6XZB0 460 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 ZNF517Q6ZMY9 492 aaPredicted RBP9.47□□□□□ -0.89
HERC1-210ENST00000560897 FAM183BPQ6ZVS7 135 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 GALNT13Q8IUC8 556 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 ARFGAP1Q8N6T3 406 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 KAT5Q92993 513 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 MR1Q95460 341 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 INTS4Q96HW7 963 aaKnown RBP9.47□□□□□ -0.89
HERC1-210ENST00000560897 EXOC2Q96KP1 924 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 ZNF641Q96N77 438 aaPredicted RBP9.47□□□□□ -0.89
HERC1-210ENST00000560897 ZNF396Q96N95 335 aaPredicted RBP9.47□□□□□ -0.89
HERC1-210ENST00000560897 TGM7Q96PF1 710 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 METTL14Q9HCE5 456 aaKnown RBP9.47□□□□□ -0.89
HERC1-210ENST00000560897 ANLNQ9NQW6 1124 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.47□□□□□ -0.89
HERC1-210ENST00000560897 PPARGC1AQ9UBK2 798 aaKnown RBP9.47□□□□□ -0.89
HERC1-210ENST00000560897 ZNF212Q9UDV6 495 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 RARRES3Q9UL19 164 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 TACC2O95359 2948 aa9.47□□□□□ -0.89
HERC1-210ENST00000560897 PPP1R3GB7ZBB8 358 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 SLC16A3O15427 465 aaKnown RBP9.46□□□□□ -0.9
HERC1-210ENST00000560897 KCNN4O15554 427 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 KDELR3O43731 214 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 IPO13O94829 963 aaKnown RBP9.46□□□□□ -0.9
HERC1-210ENST00000560897 STSP08842 583 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 AMD1P17707 334 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 SERPINA4P29622 427 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 GNA15P30679 374 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 VAV2P52735 878 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
HERC1-210ENST00000560897 POLR2LP62875 67 aaKnown RBP9.46□□□□□ -0.9
HERC1-210ENST00000560897 SLC6A3Q01959 620 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 RALGDSQ12967 914 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 ZNF235Q14590 738 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 INO80DQ53TQ3 878 aaPredicted RBP9.46□□□□□ -0.9
HERC1-210ENST00000560897 FAM199XQ6PEV8 388 aaPredicted RBP9.46□□□□□ -0.9
HERC1-210ENST00000560897 RRAGAQ7L523 313 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 SLC26A9Q7LBE3 791 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 MRGPRGQ86SM5 289 aa9.46□□□□□ -0.9
HERC1-210ENST00000560897 KCNMB4Q86W47 210 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms