RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	FGF3	P11487	239 aa	Predicted RBP	13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	CCL4	P13236	92 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	ITGB6	P18564	788 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	CES1	P23141	567 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	GNPDA1	P46926	289 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	ARSD	P51689	593 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	ARSE	P51690	589 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	MAPK10	P53779	464 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	SLC25A11	Q02978	314 aa	Known RBP	13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	PHF19	Q5T6S3	580 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	TMEM164	Q5U3C3	297 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	DENND2C	Q68D51	928 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	ALG1L	Q6GMV1	187 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	ADAMTSL4	Q6UY14	1074 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	RFLNA	Q6ZTI6	216 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	NDUFAF2	Q8N183	169 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	NSMCE1	Q8WV22	266 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	HSPH1	Q92598	858 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	FATE1	Q969F0	183 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	TAAR9	Q96RI9	348 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	NUDT22	Q9BRQ3	303 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	ABCG8	Q9H221	673 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	STARD5	Q9NSY2	213 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	IP6K2	Q9UHH9	426 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	PCDHB11	Q9Y5F2	797 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	IGHV1OR21-1	A0A087WYE8	117 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754		A0A0U1RQS6	177 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	PRL	P01236	227 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	KRT10	P13645	584 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	ZNF30	P17039	623 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	SERPINB6	P35237	376 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	IQCB1	Q15051	598 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	AMZ1	Q400G9	498 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	PYCR3	Q53H96	274 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	MANEA	Q5SRI9	462 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	SLC30A9	Q6PML9	568 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	USP45	Q70EL2	814 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	ZNF765	Q7L2R6	523 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	ATPAF2	Q8N5M1	289 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	OR4D9	Q8NGE8	314 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	PATE1	Q8WXA2	126 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	MAML1	Q92585	1016 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	COX14	Q96I36	57 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	TSGA13	Q96PP4	275 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	DPYSL5	Q9BPU6	564 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	AMACR	Q9UHK6	382 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	PLEKHM1	Q9Y4G2	1056 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754	PCDHGA4	Q9Y5G9	962 aa		13.59	□□□□□ -0.23
RNF31-223	ENST00000560754		A0A0J9YYE9	177 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	MATN3	O15232	486 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	TRBC1	P01850	177 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	CYP1A2	P05177	515 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	PYGL	P06737	847 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	SFTPC	P11686	197 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	CTPS1	P17812	591 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	WT1	P19544	449 aa	Predicted RBP	13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	CCNC	P24863	283 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	GPR1	P46091	355 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	FASLG	P48023	281 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	ZNF165	P49910	485 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	PAFAH1B3	Q15102	231 aa	Known RBP	13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	TBR1	Q16650	682 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	MAP9	Q49MG5	647 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	LRRC66	Q68CR7	880 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	RAET1G	Q6H3X3	334 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	TMEM71	Q6P5X7	295 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	NRSN1	Q8IZ57	195 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	ZSCAN1	Q8NBB4	408 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	RCBTB1	Q8NDN9	531 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	EXD1	Q8NHP7	514 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	ARRDC2	Q8TBH0	407 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	EXTL1	Q92935	676 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	SCAMP4	Q969E2	229 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	NKD1	Q969G9	470 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	AP2M1	Q96CW1	435 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	SMIM14	Q96QK8	99 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	SPRY4	Q9C004	299 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	THAP2	Q9H0W7	228 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	CDH19	Q9H159	772 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	NT5M	Q9NPB1	228 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754	TMEM98	Q9Y2Y6	226 aa		13.58	□□□□□ -0.24
RNF31-223	ENST00000560754		A0A087X0T9	212 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754		A0A1W2PQJ5	194 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	AGRP	O00253	132 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	FAM228B	P0C875	321 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	ANP32A	P39687	249 aa	Known RBP	13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	PBX1	P40424	430 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	GARS	P41250	739 aa	Known RBP	13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	STC1	P52823	247 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	KCNC4	Q03721	635 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	GALNT2	Q10471	571 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	MMRN1	Q13201	1228 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	LRP8	Q14114	963 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	ATP13A4	Q4VNC1	1196 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	NKAIN2	Q5VXU1	208 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	VASH2	Q86V25	355 aa		13.57	□□□□□ -0.24
RNF31-223	ENST00000560754	AGBL5	Q8NDL9	886 aa		13.57	□□□□□ -0.24

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