RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 BNC1Q01954 994 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 LAMB3Q13751 1172 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 NFATC4Q14934 902 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 SIRPB2Q5JXA9 342 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 ARMC3Q5W041 872 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 DBX2Q6ZNG2 339 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 HSD11B1LQ7Z5J1 315 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 TSPAN33Q86UF1 283 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 SDR16C5Q8N3Y7 309 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 MAGOHBQ96A72 148 aaKnown RBP13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 AP2M1Q96CW1 435 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 PLEKHG4BQ96PX9 1271 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 TBL1YQ9BQ87 522 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 AP1M1Q9BXS5 423 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 GPR63Q9BZJ6 419 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 WDR26Q9H7D7 661 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 EIF2B3Q9NR50 452 aaKnown RBP13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 TM7SF3Q9NS93 570 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 DLL3Q9NYJ7 618 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 COQ6Q9Y2Z9 468 aa13.96□□□□□ -0.18
PKNOX1-209ENST00000560448 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 C4orf47A7E2U8 309 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 E7EVH7 732 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 H0Y8X5 98 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 MAP2K7O14733 419 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 TNFRSF10CO14798 259 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 RAD51CO43502 376 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 GDF9O60383 454 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 PHF2O75151 1096 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 SASH3O75995 380 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 CLDN7O95471 211 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 GAS8O95995 478 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 CSF2P04141 144 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 MYBL2P10244 700 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 NME1P15531 152 aaKnown RBP13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 ETV3P41162 512 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 CDK16Q00536 496 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 SLC7A5Q01650 507 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 SEMA5AQ13591 1074 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 SNX1Q13596 522 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 PDE1CQ14123 709 aaPredicted RBP13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 INPP5AQ14642 412 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 PUM1Q14671 1186 aaKnown RBP eCLIP13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 Q6ZVL8 140 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 GLT6D1Q7Z4J2 308 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 SPATS2Q86XZ4 545 aaKnown RBP13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 KLHL7Q8IXQ5 586 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 SLC22A18ASQ8N1D0 253 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 SLCO2A1Q92959 643 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 MYOCQ99972 504 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 GORASP1Q9BQQ3 440 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 ZSCAN5AQ9BUG6 496 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 APOOQ9BUR5 198 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 MBNL1Q9NR56 388 aaKnown RBP13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 PHPT1Q9NRX4 125 aaPredicted RBP13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 RXFP3Q9NSD7 469 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 FRYLO94915 3013 aa13.95□□□□□ -0.18
PKNOX1-209ENST00000560448 NEMP2A6NFY4 417 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 C2orf81A6NN90 581 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 A8MX80 341 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 SUN1O94901 812 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 METTL18O95568 372 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 CRTAMO95727 393 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 PCCBP05166 539 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 C1SP09871 688 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 MYCLP1P12525 358 aaPredicted RBP13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 CSRP1P21291 193 aaKnown RBP13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 TAF1AQ15573 450 aaPredicted RBP13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 HENMT1Q5T8I9 393 aaKnown RBP13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 DENND2CQ68D51 928 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 RAET1GQ6H3X3 334 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 CCDC137Q6PK04 289 aaKnown RBP13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 LAYNQ6UX15 382 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 ADAMTSL4Q6UY14 1074 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 LYSMD3Q7Z3D4 306 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 KDELC2Q7Z4H8 507 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 BRSK1Q8TDC3 778 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 AENQ8WTP8 325 aaKnown RBP13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 FICDQ9BVA6 458 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 TEX101Q9BY14 249 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 DDX47Q9H0S4 455 aaKnown RBP13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 FAM83DQ9H4H8 585 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 SLC32A1Q9H598 525 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 FNDC3AQ9Y2H6 1198 aaKnown RBP13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 PKP3Q9Y446 797 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 DGKBQ9Y6T7 804 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 TP53BP1Q12888 1972 aaPredicted RBP13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 ZNF292O60281 2723 aa13.94□□□□□ -0.18
PKNOX1-209ENST00000560448 GPR89AB7ZAQ6 455 aa13.93□□□□□ -0.18
PKNOX1-209ENST00000560448 GPR89BP0CG08 455 aa13.93□□□□□ -0.18
PKNOX1-209ENST00000560448 EPHA8P29322 1005 aaPredicted RBP13.93□□□□□ -0.18
PKNOX1-209ENST00000560448 COILP38432 576 aaPredicted RBP13.93□□□□□ -0.18
PKNOX1-209ENST00000560448 GRK6P43250 576 aa13.93□□□□□ -0.18
PKNOX1-209ENST00000560448 GPR1P46091 355 aa13.93□□□□□ -0.18
PKNOX1-209ENST00000560448 SEMG2Q02383 582 aa13.93□□□□□ -0.18
PKNOX1-209ENST00000560448 CDH17Q12864 832 aa13.93□□□□□ -0.18
PKNOX1-209ENST00000560448 FZD2Q14332 565 aa13.93□□□□□ -0.18
PKNOX1-209ENST00000560448 RSPO4Q2I0M5 234 aaPredicted RBP13.93□□□□□ -0.18
PKNOX1-209ENST00000560448 TRAM1L1Q8N609 369 aa13.93□□□□□ -0.18
PKNOX1-209ENST00000560448 PDCD7Q8N8D1 485 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms