RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 WDR55Q9H6Y2 383 aaPredicted RBP9.69□□□□□ -0.86
RTF1-206ENST00000560447 MAN1C1Q9NR34 630 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 SPATS2LQ9NUQ6 558 aaKnown RBP9.69□□□□□ -0.86
RTF1-206ENST00000560447 C6orf203Q9P0P8 240 aaPredicted RBP9.69□□□□□ -0.86
RTF1-206ENST00000560447 MARCH4Q9P2E8 410 aaPredicted RBP9.69□□□□□ -0.86
RTF1-206ENST00000560447 DNMT3BQ9UBC3 853 aaKnown RBP9.69□□□□□ -0.86
RTF1-206ENST00000560447 TRAF6Q9Y4K3 522 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 PCDHB3Q9Y5E6 796 aa9.69□□□□□ -0.86
RTF1-206ENST00000560447 COPG1Q9Y678 874 aaKnown RBP9.69□□□□□ -0.86
RTF1-206ENST00000560447 HELZP42694 1942 aaKnown RBP9.68□□□□□ -0.86
RTF1-206ENST00000560447 A0A0D9SEW6 157 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.68□□□□□ -0.86
RTF1-206ENST00000560447 MEI4A8MW99 385 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 NT5C1B-RDH14C9J2C7 533 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 NEMP1O14524 444 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 UBDO15205 165 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 KLK8O60259 260 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 VPS26AO75436 327 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 GPC4O75487 556 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 SEC24AO95486 1093 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 ESR1P03372 595 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 KLKB1P03952 638 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 URODP06132 367 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 ME2P23368 584 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 CDC25CP30307 473 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 PPM1AP35813 382 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 NUDT2P50583 147 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 EPHB3P54753 998 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 RAD51Q06609 339 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 ART3Q13508 389 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 CCNIQ14094 377 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 PTK2BQ14289 1009 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 GALNT3Q14435 633 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 PDCD2Q16342 344 aaPredicted RBP9.68□□□□□ -0.86
RTF1-206ENST00000560447 CRY1Q16526 586 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 TCTN1Q2MV58 587 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 UNC50Q53HI1 259 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 COQ5Q5HYK3 327 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 GPR158Q5T848 1215 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 LYPLAL1Q5VWZ2 237 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 NXNQ6DKJ4 435 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 CXorf57Q6NSI4 855 aaKnown RBP9.68□□□□□ -0.86
RTF1-206ENST00000560447 PRMT9Q6P2P2 845 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 ZNF549Q6P9A3 640 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 NCEH1Q6PIU2 408 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 BLOC1S3Q6QNY0 202 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 TMEM207Q6UWW9 146 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 CERS6Q6ZMG9 384 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 DDX53Q86TM3 631 aaKnown RBP9.68□□□□□ -0.86
RTF1-206ENST00000560447 KBTBD6Q86V97 674 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 DENND1CQ8IV53 801 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 DSELQ8IZU8 1212 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 CPXM2Q8N436 756 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 PIP4K2CQ8TBX8 421 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 NRG4Q8WWG1 115 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 FAM136AQ96C01 138 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 ZNF689Q96CS4 500 aaPredicted RBP9.68□□□□□ -0.86
RTF1-206ENST00000560447 RMDN1Q96DB5 314 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 MYEOVQ96EZ4 313 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 PDLIM5Q96HC4 596 aaKnown RBP9.68□□□□□ -0.86
RTF1-206ENST00000560447 CLPTM1LQ96KA5 538 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 SPON2Q9BUD6 331 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 SLC25A23Q9BV35 468 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 MRPL1Q9BYD6 325 aaKnown RBP9.68□□□□□ -0.86
RTF1-206ENST00000560447 VCXQ9H320 206 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 ALG9Q9H6U8 611 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 GEMIN8Q9NWZ8 242 aaKnown RBP9.68□□□□□ -0.86
RTF1-206ENST00000560447 PSMD13Q9UNM6 376 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 PCDHB1Q9Y5F3 818 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 RAI2Q9Y5P3 530 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 ARL5AQ9Y689 179 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 OAS3Q9Y6K5 1087 aaKnown RBP9.68□□□□□ -0.86
RTF1-206ENST00000560447 SCN8AQ9UQD0 1980 aa9.68□□□□□ -0.86
RTF1-206ENST00000560447 LOC100653049A0A140TA62 436 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 ANKRD66B4E2M5 251 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 TRIM38O00635 465 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 STX7O15400 261 aaKnown RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 ADAM12O43184 909 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 BUD23O43709 281 aaKnown RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 FZD6O60353 706 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 SOCS5O75159 536 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 ZMPSTE24O75844 475 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 KRT34O76011 436 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 SRP72O76094 671 aaKnown RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 RHOBTB1O94844 696 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 SUPT7LO94864 414 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 PRLP01236 227 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 F7P08709 466 aaPredicted RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 PKMP14618 531 aaKnown RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 KCNA5P22460 613 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 RPS3P23396 243 aaKnown RBP eCLIP9.67□□□□□ -0.86
RTF1-206ENST00000560447 PTGER3P43115 390 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 SCNN1BP51168 640 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 EPHB1P54762 984 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 STX1BP61266 288 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 RPS24P62847 133 aaKnown RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 TIAL1Q01085 375 aaKnown RBP eCLIP9.67□□□□□ -0.86
RTF1-206ENST00000560447 TRAP1Q12931 704 aaKnown RBP9.67□□□□□ -0.86
RTF1-206ENST00000560447 ZNF423Q2M1K9 1284 aa9.67□□□□□ -0.86
RTF1-206ENST00000560447 PIGGQ5H8A4 983 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms