RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 FRS2Q8WU20 508 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 FGF14Q92915 247 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 GRAMD1AQ96CP6 724 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 MYADMQ96S97 322 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 EBF4Q9BQW3 602 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 TMEM120AQ9BXJ8 343 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 TRIM55Q9BYV6 548 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 ALG9Q9H6U8 611 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 ECT2Q9H8V3 914 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 HPS4Q9NQG7 708 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 DNAJC16Q9Y2G8 782 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 MED16Q9Y2X0 877 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 KIF26AQ9ULI4 1882 aaPredicted RBP10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 NUP210Q8TEM1 1887 aaPredicted RBP10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 PLK4O00444 970 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 GAPDHSO14556 408 aaPredicted RBP10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 ZBTB14O43829 449 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 DLX3O60479 287 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 SNNO75324 88 aaPredicted RBP10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 RHOBTB1O94844 696 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 PRAMEF1O95521 474 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 GSTA1P08263 222 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 TROVE2P10155 538 aaKnown RBP eCLIP10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 BPIP17213 487 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 PTSQ03393 145 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 LAMB3Q13751 1172 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 CDKN3Q16667 212 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 GAB4Q2WGN9 574 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 VWA5B1Q5TIE3 1220 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 PARM1Q6UWI2 310 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 MTDHQ86UE4 582 aaKnown RBP10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 CLDN19Q8N6F1 224 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 GPR26Q8NDV2 337 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 GPR150Q8NGU9 434 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 LPGAT1Q92604 370 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 PEX13Q92968 403 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 OTUB2Q96DC9 234 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 ERP27Q96DN0 273 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 BIRC8Q96P09 236 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 SORT1Q99523 831 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 GATA5Q9BWX5 397 aaPredicted RBP10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 MYLK2Q9H1R3 596 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 ASB8Q9H765 288 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 IL26Q9NPH9 171 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 MARK1Q9P0L2 795 aa10.84□□□□□ -0.67
SNRPA1-211ENST00000560433 MYO15AQ9UKN7 3530 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 H3BMM5 538 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 KLF11O14901 512 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 POP4O95707 220 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 ADH1CP00326 375 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 RECQLP46063 649 aaPredicted RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 SOX9P48436 509 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 ARFIP2P53365 341 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 AQP5P55064 265 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 PDAP1Q13442 181 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 TYSND1Q2T9J0 566 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 SETMARQ53H47 684 aaPredicted RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 ANKRD54Q6NXT1 300 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 PAQR3Q6TCH7 311 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 ALYREFQ86V81 257 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 MICALL1Q8N3F8 863 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 PCDH20Q8N6Y1 951 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 CCNYL1Q8N7R7 359 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 ZNF781Q8N8C0 355 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 SIDT2Q8NBJ9 832 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 GABPB2Q8TAK5 448 aaPredicted RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 PTERQ96BW5 349 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 GPR21Q99679 349 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 FAM83CQ9BQN1 747 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 AARSD1Q9BTE6 412 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 BRD9Q9H8M2 597 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 ZFP14Q9HCL3 533 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 THAP1Q9NVV9 213 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 CLEC1BQ9P126 229 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 IKZF3Q9UKT9 509 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 SARDHQ9UL12 918 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 ANKRD6Q9Y2G4 727 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 SLC30A1Q9Y6M5 507 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 COL6A3P12111 3177 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 TRIOBPQ9H2D6 2365 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 CAPN8A6NHC0 703 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 TARM1B6A8C7 271 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 SOCS5O75159 536 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 TBX10O75333 385 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 SERPINE1P05121 402 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 TSPAN8P19075 237 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 TFEBP19484 476 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 CHRM3P20309 590 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 OGNP20774 298 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 FDXRP22570 491 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 SERPINB3P29508 390 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 NNMTP40261 264 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 CSNK1DP48730 415 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 RGS19P49795 217 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 SULT2A1Q06520 285 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 CTSL3PQ5NE16 218 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 FAM45BPQ6NSW5 357 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 GDPD4Q6W3E5 623 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 KIAA0907Q7Z7F0 614 aaPredicted RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 TTC7BQ86TV6 843 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms