RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 FSTL5Q8N475 847 aaPredicted RBP15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 ALG3Q92685 438 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 AGAP3Q96P47 875 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 VAT1Q99536 393 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 HERPUD2Q9BSE4 406 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 DESI2Q9BSY9 194 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 CEP41Q9BYV8 373 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 CLPBQ9H078 707 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 ABCG4Q9H172 646 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 WDR26Q9H7D7 661 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 GLOD4Q9HC38 313 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 PCDHB1Q9Y5F3 818 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 ATMQ13315 3056 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 PTPRQQ9UMZ3 2332 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 A0A0U1RQJ8 604 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 TMEM202A6NGA9 273 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 HACD1B0YJ81 288 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 PDE2AO00408 941 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 TCEA3O75764 348 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 MYCLP1P12525 358 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 CD68P34810 354 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 NR0B2Q15466 257 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 DEFB133Q30KQ1 61 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 KCTD16Q68DU8 428 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 LVRNQ6Q4G3 990 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 NYAP1Q6ZVC0 841 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 B4GALNT4Q76KP1 1039 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 HID1Q8IV36 788 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 NRSN1Q8IZ57 195 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 SYCE1Q8N0S2 351 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 LPCAT1Q8NF37 534 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 OR56A4Q8NGH8 313 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 WDR48Q8TAF3 677 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 MAPK15Q8TD08 544 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 OR1E3Q8WZA6 343 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 NAT6Q93015 286 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 TSACCQ96A04 125 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 ZNF578Q96N58 590 aaPredicted RBP15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 QKIQ96PU8 341 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 RBM15Q96T37 977 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 LGR4Q9BXB1 951 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 ADGRE3Q9BY15 652 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 OSBPL8Q9BZF1 889 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 FGF22Q9HCT0 170 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 SEPT10Q9P0V9 454 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 TRIM10Q9UDY6 481 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 KLQ9UEF7 1012 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 ASXL3Q9C0F0 2248 aa15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 FASNP49327 2511 aaKnown RBP15.14■□□□□ 0.01
SNRPA1-210ENST00000560383 MGAQ8IWI9 3026 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 A0A0U1RQS6 177 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 YY2O15391 372 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 CSO75390 466 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 SOD1P00441 154 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 ITPKBP27987 946 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 LSSP48449 732 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 ERVPABLB-1P60509 514 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 C1orf61Q13536 156 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 NOMO1Q15155 1222 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 ELOCQ15369 112 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 FAM182AQ5T1J6 154 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 DENND2CQ68D51 928 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 GUSBP11Q6P575 273 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 RFLNAQ6ZTI6 216 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 ZC3H18Q86VM9 953 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 RNF10Q8N5U6 811 aaKnown RBP15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 HTR3CQ8WXA8 447 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 PDXPQ96GD0 296 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 UBL7Q96S82 380 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 MLPHQ9BV36 600 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 HEMGNQ9BXL5 484 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 ABCG8Q9H221 673 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 PRORYQ9H606 182 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 POLR1BQ9H9Y6 1135 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 PHPT1Q9NRX4 125 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 ADGRG1Q9Y653 693 aa15.13■□□□□ 0.01
SNRPA1-210ENST00000560383 MACROD2A1Z1Q3 448 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 RGSL1A5PLK6 1076 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 MIF4GDA9UHW6 222 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 ARHGAP6O43182 974 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 USP12O75317 370 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 CLDN7O95471 211 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 TNFP01375 233 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 PYGLP06737 847 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 ANXA6P08133 673 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 CELA2BP08218 269 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 PYGMP11217 842 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 MYF5P13349 255 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 PCBP4P57723 403 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 GABREP78334 506 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 CDK3Q00526 305 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 CDK18Q07002 472 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 ISXQ2M1V0 245 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 ADAMTSL4Q6UY14 1074 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 EFL1Q7Z2Z2 1120 aaKnown RBP15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 PEX26Q7Z412 305 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 HEATR4Q86WZ0 1026 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 SLC35F3Q8IY50 421 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 ZNF248Q8NDW4 579 aa15.12■□□□□ 0.01
SNRPA1-210ENST00000560383 SPATA22Q8NHS9 363 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms