RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 HOXC4P09017 264 aaPredicted RBP12.22□□□□□ -0.45
USP8-209ENST00000560297 RHOXF2BP0C7M4 288 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 TSHRP16473 764 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 CD38P28907 300 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 TRIM23P36406 574 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 SPAM1P38567 509 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 AFF3P51826 1226 aaKnown RBP12.22□□□□□ -0.45
USP8-209ENST00000560297 ZNF140P52738 457 aaPredicted RBP12.22□□□□□ -0.45
USP8-209ENST00000560297 YPEL5P62699 121 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 MTM1Q13496 603 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 CUL1Q13616 776 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 INPP5AQ14642 412 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 TEAD4Q15561 434 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 DUOXA1Q1HG43 343 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 CCDC38Q502W7 563 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 FNBP1LQ5T0N5 605 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 TSTD2Q5T7W7 516 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 HENMT1Q5T8I9 393 aaKnown RBP12.22□□□□□ -0.45
USP8-209ENST00000560297 PDPK2PQ6A1A2 396 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 ESRP1Q6NXG1 681 aaKnown RBP12.22□□□□□ -0.45
USP8-209ENST00000560297 CASC4Q6P4E1 433 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 RFLNAQ6ZTI6 216 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 CEP128Q6ZU80 1094 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 CENPUQ71F23 418 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 SUMF1Q8NBK3 374 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 GPR26Q8NDV2 337 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 PIGKQ92643 395 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 SCAMP4Q969E2 229 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 SIGLEC10Q96LC7 697 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 BMFQ96LC9 184 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 HINFPQ9BQA5 517 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 RHOXF2Q9BQY4 288 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 ZSCAN5AQ9BUG6 496 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 RIOK2Q9BVS4 552 aaKnown RBP12.22□□□□□ -0.45
USP8-209ENST00000560297 SPATA16Q9BXB7 569 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 PHACTR1Q9C0D0 580 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 TM9SF3Q9HD45 589 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 BPIFA1Q9NP55 256 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 IL26Q9NPH9 171 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 MBNL1Q9NR56 388 aaKnown RBP12.22□□□□□ -0.45
USP8-209ENST00000560297 CHRAC1Q9NRG0 131 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 SOX13Q9UN79 622 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 KCTD3Q9Y597 815 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 MAD1L1Q9Y6D9 718 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 ABCA7Q8IZY2 2146 aa12.22□□□□□ -0.45
USP8-209ENST00000560297 ANKRD36A6QL64 1941 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 PLXND1Q9Y4D7 1925 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 ESYT3A0FGR9 886 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 A6NNZ2 444 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 EPN2O95208 641 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 TTC4O95801 387 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 LMNAP02545 664 aaKnown RBP12.21□□□□□ -0.45
USP8-209ENST00000560297 PAMP19021 973 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 GPR1P46091 355 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 RABIFP47224 123 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 CRADDP78560 199 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 ACVR1Q04771 509 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 IRF4Q15306 451 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 TRADDQ15628 312 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 LPAL2Q16609 132 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 BBS9Q3SYG4 887 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 TEX35Q5T0J7 233 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 PEAR1Q5VY43 1037 aaPredicted RBP12.21□□□□□ -0.45
USP8-209ENST00000560297 RAET1GQ6H3X3 334 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 ABI3BPQ7Z7G0 1075 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 TRAM1L1Q8N609 369 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 EIF1ADQ8N9N8 165 aaKnown RBP12.21□□□□□ -0.45
USP8-209ENST00000560297 LRRN4CLQ8ND94 238 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 OR13C4Q8NGS5 318 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 FBXO25Q8TCJ0 367 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 IFT81Q8WYA0 676 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 RUBCNQ92622 972 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 STAMBPL1Q96FJ0 436 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 KLHDC7BQ96G42 594 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 CDKN2AIPNLQ96HQ2 116 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 SGSM3Q96HU1 749 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 DNAJC1Q96KC8 554 aaKnown RBP12.21□□□□□ -0.45
USP8-209ENST00000560297 EBNA1BP2Q99848 306 aaKnown RBP12.21□□□□□ -0.45
USP8-209ENST00000560297 FZD3Q9NPG1 666 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 GDF3Q9NR23 364 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 SYBUQ9NX95 663 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 MTRF1LQ9UGC7 380 aaKnown RBP12.21□□□□□ -0.45
USP8-209ENST00000560297 CD84Q9UIB8 345 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 GMEB2Q9UKD1 530 aa12.21□□□□□ -0.45
USP8-209ENST00000560297 TRPM6Q9BX84 2022 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 GLYATL1P3A0A0U1RQE8 302 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 POM121BA6NF01 834 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 E7ESA3 106 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 PROB1E7EW31 1015 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 VILLO15195 856 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 PCCBP05166 539 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 POLBP06746 335 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 IGFALSP35858 605 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 C21orf59P57076 290 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 CLDN2P57739 230 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 PFN3P60673 137 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 PRAMEP78395 509 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 TMPRSS15P98073 1019 aa12.2□□□□□ -0.46
USP8-209ENST00000560297 DHX9Q08211 1270 aaKnown RBP12.2□□□□□ -0.46
USP8-209ENST00000560297 PDIA2Q13087 525 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms