RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 EP300Q09472 2414 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 ZFHX2Q9C0A1 2572 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-215ENST00000560207 PIEZO1Q92508 2521 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 H7C0S8 307 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 ZNF500O60304 480 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 C1SP09871 688 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 MYCLP1P12525 358 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 ETS1P14921 441 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 ENGP17813 658 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 IGFALSP35858 605 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 PPARGP37231 505 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 SPAM1P38567 509 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 HNRNPKP61978 463 aaKnown RBP eCLIP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 IRX4P78413 519 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 CAV1Q03135 178 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 GRIK2Q13002 908 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 NFATC4Q14934 902 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 MORF4L2Q15014 288 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 GPR33Q49SQ1 333 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 PCID2Q5JVF3 399 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 HENMT1Q5T8I9 393 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 RAET1GQ6H3X3 334 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 PTAR1Q7Z6K3 402 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 CCNJLQ8IV13 435 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 TTC30BQ8N4P2 665 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 PPHLN1Q8NEY8 458 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 GABPB2Q8TAK5 448 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 HIC2Q96JB3 615 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 WDR92Q96MX6 357 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 VPS35Q96QK1 796 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 KRT12Q99456 494 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 ELF4Q99607 663 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 TTC1Q99614 292 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 FAM129AQ9BZQ8 928 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 ZCCHC2Q9C0B9 1178 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 ABCG8Q9H221 673 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 MRM3Q9HC36 420 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 DNAAF2Q9NVR5 837 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 VPS18Q9P253 973 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 SHOC2Q9UQ13 582 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 UTP11Q9Y3A2 253 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 MRFAP1Q9Y605 127 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 KNL1Q8NG31 2342 aa12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 ATXN2Q99700 1313 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 TDRD6O60522 2096 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-215ENST00000560207 A0A1B0GVT2 93 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 LNP1A1A4G5 178 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 CTAGE15A4D2H0 777 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 KLHL33A6NCF5 533 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 POM121BA6NF01 834 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 NEMP2A6NFY4 417 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 F5H423 210 aaPredicted RBP12□□□□□ -0.49
RABGGTA-215ENST00000560207 F8W8V4 182 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 DNALI1O14645 258 aaPredicted RBP12□□□□□ -0.49
RABGGTA-215ENST00000560207 PCDHGA12O60330 932 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 ZSCAN5DPP0CG00 497 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 CTAGE8P0CG41 777 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 GM2AP17900 193 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 TGM1P22735 817 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 PSMA3P25788 255 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 PTGIRP43119 386 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 CHRNA4P43681 627 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 CCT8P50990 548 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 DRG2P55039 364 aaKnown RBP12□□□□□ -0.49
RABGGTA-215ENST00000560207 CALCOCO2Q13137 446 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 MSLNQ13421 630 aaPredicted RBP12□□□□□ -0.49
RABGGTA-215ENST00000560207 PDE1CQ14123 709 aaPredicted RBP12□□□□□ -0.49
RABGGTA-215ENST00000560207 KCNJ11Q14654 390 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 KIF19Q2TAC6 998 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 FAXCQ5TGI0 409 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 CEP128Q6ZU80 1094 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 CTAGE6Q86UF2 777 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 JAMLQ86YT9 394 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 CTAGE4Q8IX94 777 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 GLIS1Q8NBF1 620 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 OR13H1Q8NG92 308 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 OR52K1Q8NGK4 314 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 NETO1Q8TDF5 533 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 CPT1BQ92523 772 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 ULK4Q96C45 1275 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 LRRC39Q96DD0 335 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 SNF8Q96H20 258 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 SGSM3Q96HU1 749 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 APOL2Q9BQE5 337 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 NLE1Q9NVX2 485 aaPredicted RBP12□□□□□ -0.49
RABGGTA-215ENST00000560207 SMARCAL1Q9NZC9 954 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 SAMD15Q9P1V8 674 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 RAPGEFL1Q9UHV5 662 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 COQ6Q9Y2Z9 468 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 SPO11Q9Y5K1 396 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 CSNK1G3Q9Y6M4 447 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 DGKBQ9Y6T7 804 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 CABIN1Q9Y6J0 2220 aa12□□□□□ -0.49
RABGGTA-215ENST00000560207 LRP4O75096 1905 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 MYLKQ15746 1914 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 ZFC3H1O60293 1989 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 PTPRZ1P23471 2315 aaPredicted RBP11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 GPR179Q6PRD1 2367 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 GLYATL1P3A0A0U1RQE8 302 aa11.99□□□□□ -0.49
RABGGTA-215ENST00000560207 MROH6A6NGR9 719 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms