RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 GATA5Q9BWX5 397 aaPredicted RBP17.78■□□□□ 0.44
SNX1-208ENST00000559844 ADGRE3Q9BY15 652 aa17.78■□□□□ 0.44
SNX1-208ENST00000559844 PNPOQ9NVS9 261 aa17.78■□□□□ 0.44
SNX1-208ENST00000559844 XPR1Q9UBH6 696 aa17.78■□□□□ 0.44
SNX1-208ENST00000559844 STK38LQ9Y2H1 464 aa17.78■□□□□ 0.44
SNX1-208ENST00000559844 VWA7Q9Y334 891 aa17.78■□□□□ 0.44
SNX1-208ENST00000559844 KCTD3Q9Y597 815 aa17.78■□□□□ 0.44
SNX1-208ENST00000559844 AURKAO14965 403 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 NARSO43776 548 aaKnown RBP17.77■□□□□ 0.44
SNX1-208ENST00000559844 TMCC1O94876 653 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 SNUPNO95149 360 aaKnown RBP17.77■□□□□ 0.44
SNX1-208ENST00000559844 GOT2P00505 430 aaKnown RBP17.77■□□□□ 0.44
SNX1-208ENST00000559844 SBK3P0C264 359 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 ESRRAP11474 423 aaPredicted RBP17.77■□□□□ 0.44
SNX1-208ENST00000559844 ADH5P11766 374 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 TYRP14679 529 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 SLC26A3P40879 764 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 CDH18Q13634 790 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 ZNF460Q14592 562 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 SDCCAG8Q86SQ7 713 aaPredicted RBP17.77■□□□□ 0.44
SNX1-208ENST00000559844 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.77■□□□□ 0.44
SNX1-208ENST00000559844 NDNQ99608 321 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 DRC3Q9H069 523 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 CDH19Q9H159 772 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 NLE1Q9NVX2 485 aaPredicted RBP17.77■□□□□ 0.44
SNX1-208ENST00000559844 VPS28Q9UK41 221 aa17.77■□□□□ 0.44
SNX1-208ENST00000559844 CD3EAPO15446 510 aaKnown RBP17.77■□□□□ 0.43
SNX1-208ENST00000559844 ZMPSTE24O75844 475 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 ATP6V1G2O95670 118 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 PENKP01210 267 aaPredicted RBP17.77■□□□□ 0.43
SNX1-208ENST00000559844 LTA4HP09960 611 aaKnown RBP17.77■□□□□ 0.43
SNX1-208ENST00000559844 GLRBP48167 497 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 ITPRIPL2Q3MIP1 535 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 ZNF789Q5FWF6 425 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 MPP7Q5T2T1 576 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 NAPRTQ6XQN6 538 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 OR4L1Q8NH43 312 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 CSGALNACT1Q8TDX6 532 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 EXOC2Q96KP1 924 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 OLFM1Q99784 485 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 FEM1AQ9BSK4 669 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 ILKAPQ9H0C8 392 aaPredicted RBP17.77■□□□□ 0.43
SNX1-208ENST00000559844 CATSPERZQ9NTU4 200 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 MARK1Q9P0L2 795 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 RAI2Q9Y5P3 530 aa17.77■□□□□ 0.43
SNX1-208ENST00000559844 KIAA1549LQ6ZVL6 1849 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 CCDC162PA2VCL2 907 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 C2orf81A6NN90 581 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 PSMA3P25788 255 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 ARRB2P32121 409 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 SLC20A2Q08357 652 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 DLG1Q12959 904 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 RCN2Q14257 317 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 CFAP157Q5JU67 520 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 GLT6D1Q7Z4J2 308 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 TTC7BQ86TV6 843 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 DCAF4L2Q8NA75 395 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 HEXDCQ8WVB3 486 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 CCDC126Q96EE4 140 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 EBF4Q9BQW3 602 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 BTBD10Q9BSF8 475 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 TBC1D10AQ9BXI6 508 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 GPAMQ9HCL2 828 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 IGSF5Q9NSI5 407 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 MARCH4Q9P2E8 410 aaPredicted RBP17.76■□□□□ 0.43
SNX1-208ENST00000559844 RAP2CQ9Y3L5 183 aa17.76■□□□□ 0.43
SNX1-208ENST00000559844 CAPN14A8MX76 684 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 CCL22O00626 93 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 HOXC11O43248 304 aaPredicted RBP17.75■□□□□ 0.43
SNX1-208ENST00000559844 SNAP91O60641 907 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 CD160O95971 181 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 RBP1P09455 135 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 SRFP11831 508 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 MZF1P28698 734 aaPredicted RBP17.75■□□□□ 0.43
SNX1-208ENST00000559844 GRIA4P48058 902 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 IDH3AP50213 366 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 ZNF140P52738 457 aaPredicted RBP17.75■□□□□ 0.43
SNX1-208ENST00000559844 FSCBQ5H9T9 825 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 NCEH1Q6PIU2 408 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 AFTPHQ6ULP2 937 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 RNF135Q8IUD6 432 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 GJD3Q8N144 294 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 NAT16Q8N8M0 369 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 LPCAT1Q8NF37 534 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 OR13C4Q8NGS5 318 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 PDCD6IPQ8WUM4 868 aaKnown RBP17.75■□□□□ 0.43
SNX1-208ENST00000559844 PRR11Q96HE9 360 aaPredicted RBP17.75■□□□□ 0.43
SNX1-208ENST00000559844 CDKN2AIPNLQ96HQ2 116 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 POPDC3Q9HBV1 291 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 INTS10Q9NVR2 710 aaKnown RBP17.75■□□□□ 0.43
SNX1-208ENST00000559844 OR51B4Q9Y5P0 310 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 VCANP13611 3396 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 OR51F1A6NGY5 319 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 SLCO1B7G3V0H7 640 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 DLX3O60479 287 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 PRLP01236 227 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 PIRTP0C851 137 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 ATP5F1P24539 256 aaPredicted RBP17.75■□□□□ 0.43
SNX1-208ENST00000559844 SERPINB5P36952 375 aa17.75■□□□□ 0.43
SNX1-208ENST00000559844 CSKP41240 450 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms